| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497896
Identifier: 34497896
GI number: 34497896
Start: 2625520
End: 2626308
Strand: Reverse
Name: 34497896
Synonym: CV_2441
Alternate gene names: NA
Gene position: 2626308-2625520 (Counterclockwise)
Preceding gene: 34497897
Following gene: 34497892
Centisome position: 55.28
GC content: 56.02
Gene sequence:
>789_bases ATGCGCCGTGAGTGCGCAAGAAGTACCCATCGGGCCTATGGCCATGGAGGGTCTTTTCTTAGCCACCACGATCTTGCCGA GCGGCTGGCTGATGCGGGTTTTATCGTGGTGGCCATTAACCATCCCGGCGATACGTTCTCGGATATGAGCCACGCGGCCG AACTGTCCGAGTTCGTGGAGCGTCCGGTCGACATAAAGCGGTTGATCGACTACTTGCTGAGCGAGGCGCCGGACGCGCCA AAAATCGACCATGCATCGATAGGCTTTTTCGGTTTTTCGCGCGGAGGCTATACCGGGCTTGTATTGGCGGGCGGCAATCC AGATTTTCTTAACGCCAATGTCCCCTGTGCGGACCTGAATCTTCCCATGTGCGCACAGCTCCGGCGAAAACAGGTCCCCA AGGGGCCATGGACTCACGATGCGCGGATCAAAGCCTACATCATTGCGGACCCGCTCAACGAGTTTCCAACAGCAGACAGT CTGAAAAGTGTAAAAGCGCCCATTCAGCTCTGGGCTTCACAACATGGCGGTGACGGCGTATTACCGGAAACTGTTCCTGC ACTAGCCAATGCGCTTCCCATCAGGCCAGAATTTCACCTTGTGTCCGGTTCGGCGCATTTTGCCTTTCTTGCGCCTTGCC CTGAAGCATTGGAGAAAGATGCGCCTGAGCTCTGCGTCGACGCGCCAGGATTTGACCGCATAGCCTTCCACAAAGAGCTT GGCGAGAAGGCGCTTGAGTTTTTTCAAGCCAACATTGGCAATGCACGCCATGCAGGCGTTGCAGACTAA
Upstream 100 bases:
>100_bases TCTGTCTGTACACGGCGATCACACATGCGGCAGGAATTAAGTTTGCTCAAGTCCCAGCCGATGCAAATGGCCCGGCGCTC AAGGCGATGGTGTGGACGCC
Downstream 100 bases:
>100_bases CGGATGAGCTTGATCCAACGCCCGAAGGCCCAATTGCGTCGCACCGAAGTAGTGCGAGATATTCTAAAAAAGCCGCGCGG TACTGCCCAGGAAGGCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Signal Peptide; Dienelactone Hydrolase-Like Protein; Lipoprotein; Dienelactone Hydrolase-Like; Hydrolase Putative Exported Protein; Hydrolase Protein; Acyl Transferase Hydrolase; Dienelactone Hydrolase Protein
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MRRECARSTHRAYGHGGSFLSHHDLAERLADAGFIVVAINHPGDTFSDMSHAAELSEFVERPVDIKRLIDYLLSEAPDAP KIDHASIGFFGFSRGGYTGLVLAGGNPDFLNANVPCADLNLPMCAQLRRKQVPKGPWTHDARIKAYIIADPLNEFPTADS LKSVKAPIQLWASQHGGDGVLPETVPALANALPIRPEFHLVSGSAHFAFLAPCPEALEKDAPELCVDAPGFDRIAFHKEL GEKALEFFQANIGNARHAGVAD
Sequences:
>Translated_262_residues MRRECARSTHRAYGHGGSFLSHHDLAERLADAGFIVVAINHPGDTFSDMSHAAELSEFVERPVDIKRLIDYLLSEAPDAP KIDHASIGFFGFSRGGYTGLVLAGGNPDFLNANVPCADLNLPMCAQLRRKQVPKGPWTHDARIKAYIIADPLNEFPTADS LKSVKAPIQLWASQHGGDGVLPETVPALANALPIRPEFHLVSGSAHFAFLAPCPEALEKDAPELCVDAPGFDRIAFHKEL GEKALEFFQANIGNARHAGVAD >Mature_262_residues MRRECARSTHRAYGHGGSFLSHHDLAERLADAGFIVVAINHPGDTFSDMSHAAELSEFVERPVDIKRLIDYLLSEAPDAP KIDHASIGFFGFSRGGYTGLVLAGGNPDFLNANVPCADLNLPMCAQLRRKQVPKGPWTHDARIKAYIIADPLNEFPTADS LKSVKAPIQLWASQHGGDGVLPETVPALANALPIRPEFHLVSGSAHFAFLAPCPEALEKDAPELCVDAPGFDRIAFHKEL GEKALEFFQANIGNARHAGVAD
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28348; Mature: 28348
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRECARSTHRAYGHGGSFLSHHDLAERLADAGFIVVAINHPGDTFSDMSHAAELSEFVE CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHH RPVDIKRLIDYLLSEAPDAPKIDHASIGFFGFSRGGYTGLVLAGGNPDFLNANVPCADLN CCCCHHHHHHHHHHCCCCCCCCCCCEECEEEECCCCCEEEEEECCCCCEECCCCCCCCCC LPMCAQLRRKQVPKGPWTHDARIKAYIIADPLNEFPTADSLKSVKAPIQLWASQHGGDGV CHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC LPETVPALANALPIRPEFHLVSGSAHFAFLAPCPEALEKDAPELCVDAPGFDRIAFHKEL CHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCHHHHHCCCCCEEECCCCCCHHHHHHHH GEKALEFFQANIGNARHAGVAD HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRRECARSTHRAYGHGGSFLSHHDLAERLADAGFIVVAINHPGDTFSDMSHAAELSEFVE CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHH RPVDIKRLIDYLLSEAPDAPKIDHASIGFFGFSRGGYTGLVLAGGNPDFLNANVPCADLN CCCCHHHHHHHHHHCCCCCCCCCCCEECEEEECCCCCEEEEEECCCCCEECCCCCCCCCC LPMCAQLRRKQVPKGPWTHDARIKAYIIADPLNEFPTADSLKSVKAPIQLWASQHGGDGV CHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC LPETVPALANALPIRPEFHLVSGSAHFAFLAPCPEALEKDAPELCVDAPGFDRIAFHKEL CHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCHHHHHCCCCCEEECCCCCCHHHHHHHH GEKALEFFQANIGNARHAGVAD HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA