| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ppx [H]
Identifier: 33863594
GI number: 33863594
Start: 1411449
End: 1413149
Strand: Reverse
Name: ppx [H]
Synonym: PMT1327
Alternate gene names: 33863594
Gene position: 1413149-1411449 (Counterclockwise)
Preceding gene: 33863597
Following gene: 33863588
Centisome position: 58.62
GC content: 54.09
Gene sequence:
>1701_bases ATGGCAAAGTGGTCTCGTTCCAGGCTCCTGTACTTCATGCCAGGTGTCGAGCCATTGCCTTTCGGTGTGGTTGATGTCGA GCAGGAGGAGGCCAGGTACGTCAGTGCTGGTCAGCTCCGTTCTGAGCGAGAGCTCCGCAACGTTGCCGCGATTGATATTG GAACCAATTCCACCCATCTCTTGGTGGCGTCGGTTGATCCTTCTCTGCATACCTTCAGCGTTGATCTTGCAGAGAAATCA ACCACCAGGCTTGGTGAGCGAGACCCTGACTCTGGAGAGCTCACGGGTCCTGCTATGGAGCGGGTATTTGAGACACTCAA ACGTTTTAAGGAGCTAGCCGCCAGCCATCAGGTGGAGCAGGTGGTTGCGTCGGCGACTAGCGCAGTACGTGAAGCTTCAA ATGGGCGGGATTTTTTGCAACGGATTCAGGATCAGCTTGGCCTTGAGGTGGATCTGTTGAGCGGTGCTGAGGAAGCACGA CTGATCTATTTGGGTGTTTTGTCTGGCATGCCTTTTGGGGAGTGTCCCCATCTTTTGCTCGATATCGGTGGCGGTTCCAC AGAACTCATCCTCGCGGATGGTCGCGATGCTCGGGCTCTGACAAGCACGCGGGTTGGTGCGGTTCGGCTACAGAGGGATT TTGTCAAGCATGAACCAATCCCCCCTCAACGGCGTTCCTTTTTGCAGACATTTATTCAGGGTTCTTTAGAGCCAGCTGTT GATAAGGTCTGCCGTCGCATCAAGCCTGGGGAGAGCCCTGTGATGGTTGCCACCAGTGGAACCGCCATGGCCATCGGTGC TTTGTTGGCTAGCGAAGACGATCGCCCTCCGTTGAGATTGCATGGCTATCGAATCACACGGCAGCAGCTTGATGGCCTGG TTGAGAAGCTGATAGCGATGACGCCTGAGCAGCGTCGCATCCAGACGCCGATTAATGATCGCCGTGCCGAAATCATCGTT CCGGGTGCGCTGATTCTTCAAACTGCCATGCAGATGCTCTCTGCTGATGAGCTGGTGCTGAGTGAAAGGGCTCTGAGGGA GGGGTTGATCGTTGATTGGATGCTGCGACATGGCCTACTGGAGGATCGCTTTAGTTTTCAGAGCAGTATTCGTCAGCGCA CCGTGATTCATCAGGTGCAGCGTTTTGCAGTGAATCACCGCCGTGCAGAGCGTGTAGCCAGCCATGCACTCAGCCTTTAC GACCACACACATGGTGTTCTTCATCAAGATGATGGAGGTGGTCGGGATCTGCTTTGGGCATCGGCCATGTTGCATGCCTG TGGTCAGCACATCAATCTCAGTGCTTATCACAAGCATTCCTGGTATCTCATTCGTCATGGCGAGTTGCTCGGCTATTCGG AAGCGGAGCATTTGATGGTTGCGGCTATTGCGCGCTATCACCGCCGCAGTCTTCCCAAGAAGCGTCATCTGGAATGGCAG GCTTTAGCCACCCGGGAGCATCGTCGCCTCGTTGCCGAGATGGCTTTGTTGCTGCGATTAGCAGCAGCCATTGATCGCCG TCCTGAGCCAGTGGTGGCTGCAATAAGAGTGAAGTCCGCTGATGATGATCAGATTGTCTTTGAACTAGTGCCGGAAGGAT TGAATCAGAATCTCAGCCTTGAACAATGGAGCTTGAAGAGCTGTGCTTCGGTTGTGAAAGAAGCAAGCGGCGTAACCATG AAAGTTGTCGTTAAGGAGTGA
Upstream 100 bases:
>100_bases AGCTCTAGCCATTGCCTTAAGCCATTGGAGAAGGATCTGCTGGTCACGGGTTTCTGGGTTTGAAGAACCCTAGGGAGGGA CCTCCAGACATCGTTGGCTG
Downstream 100 bases:
>100_bases ACTTAGTTCAGTATTAGGTTGTTGTTGGATAATTGATGCCAGCGGATCTTTCTAATTGCACCCAGAGCAGTAGGCGGTTT TCGATTATGAGTTATATGAA
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MAKWSRSRLLYFMPGVEPLPFGVVDVEQEEARYVSAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAEKS TTRLGERDPDSGELTGPAMERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEAR LIYLGVLSGMPFGECPHLLLDIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAV DKVCRRIKPGESPVMVATSGTAMAIGALLASEDDRPPLRLHGYRITRQQLDGLVEKLIAMTPEQRRIQTPINDRRAEIIV PGALILQTAMQMLSADELVLSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLY DHTHGVLHQDDGGGRDLLWASAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQ ALATREHRRLVAEMALLLRLAAAIDRRPEPVVAAIRVKSADDDQIVFELVPEGLNQNLSLEQWSLKSCASVVKEASGVTM KVVVKE
Sequences:
>Translated_566_residues MAKWSRSRLLYFMPGVEPLPFGVVDVEQEEARYVSAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAEKS TTRLGERDPDSGELTGPAMERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEAR LIYLGVLSGMPFGECPHLLLDIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAV DKVCRRIKPGESPVMVATSGTAMAIGALLASEDDRPPLRLHGYRITRQQLDGLVEKLIAMTPEQRRIQTPINDRRAEIIV PGALILQTAMQMLSADELVLSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLY DHTHGVLHQDDGGGRDLLWASAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQ ALATREHRRLVAEMALLLRLAAAIDRRPEPVVAAIRVKSADDDQIVFELVPEGLNQNLSLEQWSLKSCASVVKEASGVTM KVVVKE >Mature_565_residues AKWSRSRLLYFMPGVEPLPFGVVDVEQEEARYVSAGQLRSERELRNVAAIDIGTNSTHLLVASVDPSLHTFSVDLAEKST TRLGERDPDSGELTGPAMERVFETLKRFKELAASHQVEQVVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEARL IYLGVLSGMPFGECPHLLLDIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAVD KVCRRIKPGESPVMVATSGTAMAIGALLASEDDRPPLRLHGYRITRQQLDGLVEKLIAMTPEQRRIQTPINDRRAEIIVP GALILQTAMQMLSADELVLSERALREGLIVDWMLRHGLLEDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLYD HTHGVLHQDDGGGRDLLWASAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQA LATREHRRLVAEMALLLRLAAAIDRRPEPVVAAIRVKSADDDQIVFELVPEGLNQNLSLEQWSLKSCASVVKEASGVTMK VVVKE
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=441, Percent_Identity=27.891156462585, Blast_Score=148, Evalue=1e-36, Organism=Escherichia coli, GI48994966, Length=427, Percent_Identity=28.5714285714286, Blast_Score=136, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 63178; Mature: 63047
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKWSRSRLLYFMPGVEPLPFGVVDVEQEEARYVSAGQLRSERELRNVAAIDIGTNSTHL CCCCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEE LVASVDPSLHTFSVDLAEKSTTRLGERDPDSGELTGPAMERVFETLKRFKELAASHQVEQ EEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEARLIYLGVLSGMPFGECPHLLL HHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEE DIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAV ECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHH DKVCRRIKPGESPVMVATSGTAMAIGALLASEDDRPPLRLHGYRITRQQLDGLVEKLIAM HHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECEEECHHHHHHHHHHHHHC TPEQRRIQTPINDRRAEIIVPGALILQTAMQMLSADELVLSERALREGLIVDWMLRHGLL CCCHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH EDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLYDHTHGVLHQDDGGGRDLLWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHH SAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQ HHHHHHCCCCCCEEEEECCCEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCHHHCCCHH ALATREHRRLVAEMALLLRLAAAIDRRPEPVVAAIRVKSADDDQIVFELVPEGLNQNLSL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCHHHCCCCCCC EQWSLKSCASVVKEASGVTMKVVVKE HHHHHHHHHHHHHHCCCCEEEEEEEC >Mature Secondary Structure AKWSRSRLLYFMPGVEPLPFGVVDVEQEEARYVSAGQLRSERELRNVAAIDIGTNSTHL CCCCCCCEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEE LVASVDPSLHTFSVDLAEKSTTRLGERDPDSGELTGPAMERVFETLKRFKELAASHQVEQ EEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VVASATSAVREASNGRDFLQRIQDQLGLEVDLLSGAEEARLIYLGVLSGMPFGECPHLLL HHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCEEEEEEECCCCCCCCCCEEEE DIGGGSTELILADGRDARALTSTRVGAVRLQRDFVKHEPIPPQRRSFLQTFIQGSLEPAV ECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHH DKVCRRIKPGESPVMVATSGTAMAIGALLASEDDRPPLRLHGYRITRQQLDGLVEKLIAM HHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCCCCEEEECEEECHHHHHHHHHHHHHC TPEQRRIQTPINDRRAEIIVPGALILQTAMQMLSADELVLSERALREGLIVDWMLRHGLL CCCHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHH EDRFSFQSSIRQRTVIHQVQRFAVNHRRAERVASHALSLYDHTHGVLHQDDGGGRDLLWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHH SAMLHACGQHINLSAYHKHSWYLIRHGELLGYSEAEHLMVAAIARYHRRSLPKKRHLEWQ HHHHHHCCCCCCEEEEECCCEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCHHHCCCHH ALATREHRRLVAEMALLLRLAAAIDRRPEPVVAAIRVKSADDDQIVFELVPEGLNQNLSL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHCCHHHCCCCCCC EQWSLKSCASVVKEASGVTMKVVVKE HHHHHHHHHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]