Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33863579

Identifier: 33863579

GI number: 33863579

Start: 1398282

End: 1398929

Strand: Reverse

Name: 33863579

Synonym: PMT1311

Alternate gene names: NA

Gene position: 1398929-1398282 (Counterclockwise)

Preceding gene: 33863580

Following gene: 33863578

Centisome position: 58.03

GC content: 55.56

Gene sequence:

>648_bases
GTGCTGTCAATCCCTTCGGCGACGGTCAGGCCAGCCGTCGCATTCTTGAGGCAAGTTGTGCATTCCTGGGCGTCTGAGGC
TGCCTTTAGTTCTTGTGGTCACTACCGCTGGTGGTTGAAGCGCAGCCTTGGGCAATGCGAACGCACGTTGCTTTTCATTG
GCTTGAATCCCTCCACCGCTACAGCGTCAGAGGATGATCCAACCTTGCGGCGGTTGCTGGGGTTTTGCCGCTCCTGGGGT
TATGGACACCTTTTTGTTGTGAATCTATTTGCGCGGATCAGTCAATCCCCAGCGCTGCTTAGGCACTGTGCTGATCCGAT
TGGTGATGCAAATGATGATCAGCTTTTGACTCGGGCACGCCAGTGGTCTGAGAGCCCTAATTGGGACCTTTGGTTTGGTT
GGGGGTGCGGTGGAACTTTGCGTCGACGTGATCTTGCCGTCCAGGCTTTGTTGGAGCGTCATCGCCAGAACCGCATCAGC
AATATCCCTGATGCTCGCGGCCCTCTCTCGCTTGGTTTGACGCGTGAGGGACACCCCTGCCATCCCCTTTACATGCCTGG
CAAAGAGGTCCTTCGACCATTCAATTGGGCAAGTGGGGCAACTATCGGCCATCCTGAGTTGATGGACCTTGGTATTACGG
TTCACTGA

Upstream 100 bases:

>100_bases
GAAGCGGGTACGGCCAGGCTGGTTGGTACCGATCCGGAGATGATCGTGACTGAGACAGCTTCCTTGCTTGATGATTCAAG
CGCCTACGAGGCGATGGCAC

Downstream 100 bases:

>100_bases
TGACACGCACCCCACGCCGCTATGCGGTGTACCTCCATCTCTCCGGGGGGCAGACCGAAGAGGTTCATTTCCCTACTCTT
GAGACGTTTCAGCAGTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG
YGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRARQWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRIS
NIPDARGPLSLGLTREGHPCHPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH

Sequences:

>Translated_215_residues
MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG
YGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRARQWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRIS
NIPDARGPLSLGLTREGHPCHPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH
>Mature_215_residues
MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG
YGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRARQWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRIS
NIPDARGPLSLGLTREGHPCHPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH

Specific function: Unknown

COG id: COG4333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24147; Mature: 24147

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCC
TASEDDPTLRRLLGFCRSWGYGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRAR
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHH
QWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRISNIPDARGPLSLGLTREGHPC
HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC
HPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCC
TASEDDPTLRRLLGFCRSWGYGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRAR
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHH
QWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRISNIPDARGPLSLGLTREGHPC
HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC
HPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA