| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863577
Identifier: 33863577
GI number: 33863577
Start: 1396782
End: 1398047
Strand: Reverse
Name: 33863577
Synonym: PMT1309
Alternate gene names: NA
Gene position: 1398047-1396782 (Counterclockwise)
Preceding gene: 33863578
Following gene: 33863573
Centisome position: 57.99
GC content: 57.03
Gene sequence:
>1266_bases ATGACACCTGAGCGGTTAGGCCTGCTTTGGGGGATCACCGTCTTTGCAGGTGCCGGAGCTCGGATTTTGTCTGCTCTCTC TGGCCTTCCTGGTGTGGTGCTGTTGTTGCTATCTGGCCTGCTGATTGGTCGATCGGGCCTTGGTTTGGTTGAACCGCTAG ATCTTGGTCAAGGACTTGAGACGATCGTTGGTCTGCTTGTGAGCCTTGTGCTCTTTGACGGTGGTCTCAATCTGCGCCTC CCTGGCGACACCATCAAGTCAACGGTGCTGCGCATCTTGCTGATCCGACTAGTGATTTCACTGGCCGCGGGTCTGTTGGC GGCGCATTGGCTGGCTGGTTTGGGTTGGTCAGTGGCAGCGGTTTACAGCGCCATCGTGCTGGCTACTGGTCCGACTGTTG TGACCCCGTTGGTGCAGCAGATCCGTTTAGCTTCTCCTCTAGGGGATGTCCTTGAGGCAGAGGGATTGGTGCTTGAGCCA GTGGGTGCTGTGCTGGCCTTGCTTTTGCTGGAGTTATTGCTGGGCGATTTGCACGGTTGGCGGGAGGTTGCCTTCGGGTT GCTGGCCCGCCTGGGTGGAGGCGTGTTGATGGGGGCTGCTGCTGGTTGGCTTTTGTCAGAGGGATTGCGGCGTTTAAAAC CGGACCCTTCGGTAGGGCTGAGGTTGCAGCTCACCTTGGGTGTGTTGTTCCTCTTGTACGCAGTTTGTGAATGGTTGTTG CCGGAGTCGGGATTGCCGGCTTCTGTAGCAGCGGGGGTGGTGGTCGGTCGCAGGCCTGTTACCCAGTCCGATCAGCTCGA TGAGTTGATCCGGGAGCTGGCCCGTCTTGCTATCACAATGTTATTTCCACTTTTGGCTGCTGATGTCTCATGGGGTGAGC TAAGTCCGCTTGGCTGGGGGGGGGTCAGTTGTGTCCTCGTACTGATGTTGGTTGTGCGTCCTGTTGCTGTAAGCCTGGCG ACGATTGGCTTGCCTCTTGATTTCAGGCAGCGATTGTTTCTTGGTTGGCTTGCACCACGTGGGATTGTTACGGCCGCCGT GGCCTCTTTGTTTGCGATTCGCCTTGAGCAGGCTGGGATTTTAGGAGCCGGTCGGTTGCAAGGTTTGGTCTTTCTCACCA TCCTGATGACAGTTGGCATTCAAGGCCTCACGGCCCAGCCGCTGGCCAAGGCCCTGGGTTTAATCGCTCCTGAAGATTCA AACGAAGACGACTGCTCAGAGACAACGACGCAGCCTGTTCAAGTCTTGCCCGATCCTGGCCAGTAA
Upstream 100 bases:
>100_bases TTCGTGAACGTACCGCTTAGCGAGCTCGATGGAGAGTATCTGGTGGTGCGTCCAGAGGCTGTGATCGGTGTGAGAGTGGA ACCTCAGTTCGCAGCCCTCG
Downstream 100 bases:
>100_bases TCCCCATGTTGTGATTAGGTCTGGCCCTTGTAGGCGGCCTAGAAGCGCAGCTCTGAGGCTTTTCATGATCACACCTTTTT TGACGTTGGCAGCCTGAGCA
Product: CPA1 family Na+/H+ antiporter
Products: NA
Alternate protein names: MjNhaP2 [H]
Number of amino acids: Translated: 421; Mature: 420
Protein sequence:
>421_residues MTPERLGLLWGITVFAGAGARILSALSGLPGVVLLLLSGLLIGRSGLGLVEPLDLGQGLETIVGLLVSLVLFDGGLNLRL PGDTIKSTVLRILLIRLVISLAAGLLAAHWLAGLGWSVAAVYSAIVLATGPTVVTPLVQQIRLASPLGDVLEAEGLVLEP VGAVLALLLLELLLGDLHGWREVAFGLLARLGGGVLMGAAAGWLLSEGLRRLKPDPSVGLRLQLTLGVLFLLYAVCEWLL PESGLPASVAAGVVVGRRPVTQSDQLDELIRELARLAITMLFPLLAADVSWGELSPLGWGGVSCVLVLMLVVRPVAVSLA TIGLPLDFRQRLFLGWLAPRGIVTAAVASLFAIRLEQAGILGAGRLQGLVFLTILMTVGIQGLTAQPLAKALGLIAPEDS NEDDCSETTTQPVQVLPDPGQ
Sequences:
>Translated_421_residues MTPERLGLLWGITVFAGAGARILSALSGLPGVVLLLLSGLLIGRSGLGLVEPLDLGQGLETIVGLLVSLVLFDGGLNLRL PGDTIKSTVLRILLIRLVISLAAGLLAAHWLAGLGWSVAAVYSAIVLATGPTVVTPLVQQIRLASPLGDVLEAEGLVLEP VGAVLALLLLELLLGDLHGWREVAFGLLARLGGGVLMGAAAGWLLSEGLRRLKPDPSVGLRLQLTLGVLFLLYAVCEWLL PESGLPASVAAGVVVGRRPVTQSDQLDELIRELARLAITMLFPLLAADVSWGELSPLGWGGVSCVLVLMLVVRPVAVSLA TIGLPLDFRQRLFLGWLAPRGIVTAAVASLFAIRLEQAGILGAGRLQGLVFLTILMTVGIQGLTAQPLAKALGLIAPEDS NEDDCSETTTQPVQVLPDPGQ >Mature_420_residues TPERLGLLWGITVFAGAGARILSALSGLPGVVLLLLSGLLIGRSGLGLVEPLDLGQGLETIVGLLVSLVLFDGGLNLRLP GDTIKSTVLRILLIRLVISLAAGLLAAHWLAGLGWSVAAVYSAIVLATGPTVVTPLVQQIRLASPLGDVLEAEGLVLEPV GAVLALLLLELLLGDLHGWREVAFGLLARLGGGVLMGAAAGWLLSEGLRRLKPDPSVGLRLQLTLGVLFLLYAVCEWLLP ESGLPASVAAGVVVGRRPVTQSDQLDELIRELARLAITMLFPLLAADVSWGELSPLGWGGVSCVLVLMLVVRPVAVSLAT IGLPLDFRQRLFLGWLAPRGIVTAAVASLFAIRLEQAGILGAGRLQGLVFLTILMTVGIQGLTAQPLAKALGLIAPEDSN EDDCSETTTQPVQVLPDPGQ
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 43846; Mature: 43715
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPERLGLLWGITVFAGAGARILSALSGLPGVVLLLLSGLLIGRSGLGLVEPLDLGQGLE CCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHH TIVGLLVSLVLFDGGLNLRLPGDTIKSTVLRILLIRLVISLAAGLLAAHWLAGLGWSVAA HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VYSAIVLATGPTVVTPLVQQIRLASPLGDVLEAEGLVLEPVGAVLALLLLELLLGDLHGW HHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCHH REVAFGLLARLGGGVLMGAAAGWLLSEGLRRLKPDPSVGLRLQLTLGVLFLLYAVCEWLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHC PESGLPASVAAGVVVGRRPVTQSDQLDELIRELARLAITMLFPLLAADVSWGELSPLGWG CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GVSCVLVLMLVVRPVAVSLATIGLPLDFRQRLFLGWLAPRGIVTAAVASLFAIRLEQAGI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC LGAGRLQGLVFLTILMTVGIQGLTAQPLAKALGLIAPEDSNEDDCSETTTQPVQVLPDPG CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEECCCCC Q C >Mature Secondary Structure TPERLGLLWGITVFAGAGARILSALSGLPGVVLLLLSGLLIGRSGLGLVEPLDLGQGLE CHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHH TIVGLLVSLVLFDGGLNLRLPGDTIKSTVLRILLIRLVISLAAGLLAAHWLAGLGWSVAA HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VYSAIVLATGPTVVTPLVQQIRLASPLGDVLEAEGLVLEPVGAVLALLLLELLLGDLHGW HHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHCHH REVAFGLLARLGGGVLMGAAAGWLLSEGLRRLKPDPSVGLRLQLTLGVLFLLYAVCEWLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHC PESGLPASVAAGVVVGRRPVTQSDQLDELIRELARLAITMLFPLLAADVSWGELSPLGWG CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC GVSCVLVLMLVVRPVAVSLATIGLPLDFRQRLFLGWLAPRGIVTAAVASLFAIRLEQAGI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCC LGAGRLQGLVFLTILMTVGIQGLTAQPLAKALGLIAPEDSNEDDCSETTTQPVQVLPDPG CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEECCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]