| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is F18O21.290 [H]
Identifier: 33863444
GI number: 33863444
Start: 1265520
End: 1266794
Strand: Reverse
Name: F18O21.290 [H]
Synonym: PMT1174
Alternate gene names: 33863444
Gene position: 1266794-1265520 (Counterclockwise)
Preceding gene: 33863447
Following gene: 109150046
Centisome position: 52.55
GC content: 56.0
Gene sequence:
>1275_bases ATGGGATTCGCCCCAGTCAGCACCTGTCTCTTGAATGGCCCGCTCGGCAGTCTGGAAGTCAGTTGCAAACAAAGCGGCTT GAACCAACCCACCACCCACTATCGCGAAGGCTCAGTCGTTTTGGAGCCAGGAGGTGGTTTCTTCCGCCCAGAGTCTCGTC CTTCCCGTGATCTTTCGGTTTTATTGGCTGCTTTTCAGCAGCAGAGGAGAGAGAAGTTTTCGCCTGCTTTGCGCTGGTTG GACCTTATGGCTGGTTGCGGTATTCGTGCTTTGCGCTGGGGGTTGGAGGCTGTTAAGCCCTCATTGTTGGCGTCAGGAGT AGAGCAGCTGCCAGAGCTGTGGGTGAATGATGCCGATCTTGAGCGCGCTTCTCTTTTGGAGAGGAATCTGGCCCCTCTGC GCCAAGAGCAAATCTCGCTAAAGCTTTTTCATCAGCCCGCTGAGGTCCTGCTGAGCCGTGCCTACCTCGATCAGTGTCGT TTTGATCTGATTGATCTCGATTGTTTTGGTTGTCCGAATGCGTTTCTGCAACCTGTGTTGCAGGTTCTCGCTTCTGAGGG GTTTTTGCTGCTTTCAAGCAGTGATGGTCGCTCTCCCACAGGTCATGACCGGCCAGGGGCAATTCGCAGTTTGGCTGCTG CGGCTCGGGTGCATCCAGCCAGCTGGGAGATCGCTTTGAGGCTGCAGCTTGGGGTTCTTGCACGACATGCCTGGCTGCTA GGGCGTGGCTTGGAGCCCCTGGTCAGCTTTAGTGAAGGTCGTACTTTTCGTGTTGCGGTAAGGATCAAGCGTCGAATTTC TGCATGTGAGGAGAGCCATCTTGGGCTTTTAGCTCGCTGTGAGGCTTGTGGTGCTCAGCTTGCTCAACCACTTCTCTCCC TGCAGGGATGGTCAGGGTGTATGTGTTCACAAGGAGGTGGCCGCTGGGCGGTGAGCGGTCCCCTTTGGCTGGGCCCCCTT CAGTCGCCAGTTGTGTTGGCCGATTTGTTGGTGTTAGCAGAACAGTCGATCGTTCCGATCGCATCCGCCACACTTCGGCT GTTGCATCGCTTGCAGTCTGATATCGGCTTGCCGGTCTATTGCTGGTCCACAGCTGAACTGGCCAAGCGTCTGGTTTTGT CTGGCCCGCCGTCTGTTTTGGCATTGGTCAGGGCTTTGCGTTTTGCTGGCCATGAGGCTTGCGGCAGTGCCGTGATGGCA GGACAACTACGAACCGATGCGACAGTGACCGAGCTTTTGCGGATTTGCCACGAGATGTGTCAGGAAGGGCGTTAA
Upstream 100 bases:
>100_bases GAGCGCTGCTGGCACCGAATCCGTGGATGAGCACGAGTGGCCGTGCATCCTCTGCTCCCAGTACACGCCAGTGACAACGT AGGCCTTGCCAATACCAATC
Downstream 100 bases:
>100_bases ATGGTGTGCGTGATTCAAATGCCCATTCATGGCTTCGGAGATTTTCGGGATTGCTGCCGTCTTCTGGGTGTTGATCCCAG TTGGTCTTGCAGGTGGTGCT
Product: N2,N2-dimethylguanosine tRNA methyltransferase-like protein
Products: NA
Alternate protein names: tRNA 2,2-dimethylguanosine-26 methyltransferase; tRNA(guanine-26,N(2)-N(2)) methyltransferase; tRNA(m(2,2)G26)dimethyltransferase [H]
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MGFAPVSTCLLNGPLGSLEVSCKQSGLNQPTTHYREGSVVLEPGGGFFRPESRPSRDLSVLLAAFQQQRREKFSPALRWL DLMAGCGIRALRWGLEAVKPSLLASGVEQLPELWVNDADLERASLLERNLAPLRQEQISLKLFHQPAEVLLSRAYLDQCR FDLIDLDCFGCPNAFLQPVLQVLASEGFLLLSSSDGRSPTGHDRPGAIRSLAAAARVHPASWEIALRLQLGVLARHAWLL GRGLEPLVSFSEGRTFRVAVRIKRRISACEESHLGLLARCEACGAQLAQPLLSLQGWSGCMCSQGGGRWAVSGPLWLGPL QSPVVLADLLVLAEQSIVPIASATLRLLHRLQSDIGLPVYCWSTAELAKRLVLSGPPSVLALVRALRFAGHEACGSAVMA GQLRTDATVTELLRICHEMCQEGR
Sequences:
>Translated_424_residues MGFAPVSTCLLNGPLGSLEVSCKQSGLNQPTTHYREGSVVLEPGGGFFRPESRPSRDLSVLLAAFQQQRREKFSPALRWL DLMAGCGIRALRWGLEAVKPSLLASGVEQLPELWVNDADLERASLLERNLAPLRQEQISLKLFHQPAEVLLSRAYLDQCR FDLIDLDCFGCPNAFLQPVLQVLASEGFLLLSSSDGRSPTGHDRPGAIRSLAAAARVHPASWEIALRLQLGVLARHAWLL GRGLEPLVSFSEGRTFRVAVRIKRRISACEESHLGLLARCEACGAQLAQPLLSLQGWSGCMCSQGGGRWAVSGPLWLGPL QSPVVLADLLVLAEQSIVPIASATLRLLHRLQSDIGLPVYCWSTAELAKRLVLSGPPSVLALVRALRFAGHEACGSAVMA GQLRTDATVTELLRICHEMCQEGR >Mature_423_residues GFAPVSTCLLNGPLGSLEVSCKQSGLNQPTTHYREGSVVLEPGGGFFRPESRPSRDLSVLLAAFQQQRREKFSPALRWLD LMAGCGIRALRWGLEAVKPSLLASGVEQLPELWVNDADLERASLLERNLAPLRQEQISLKLFHQPAEVLLSRAYLDQCRF DLIDLDCFGCPNAFLQPVLQVLASEGFLLLSSSDGRSPTGHDRPGAIRSLAAAARVHPASWEIALRLQLGVLARHAWLLG RGLEPLVSFSEGRTFRVAVRIKRRISACEESHLGLLARCEACGAQLAQPLLSLQGWSGCMCSQGGGRWAVSGPLWLGPLQ SPVVLADLLVLAEQSIVPIASATLRLLHRLQSDIGLPVYCWSTAELAKRLVLSGPPSVLALVRALRFAGHEACGSAVMAG QLRTDATVTELLRICHEMCQEGR
Specific function: Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups [H]
COG id: COG1867
COG function: function code J; N2,N2-dimethylguanosine tRNA methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TRM1 family [H]
Homologues:
Organism=Homo sapiens, GI8923219, Length=361, Percent_Identity=26.0387811634349, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI209862871, Length=361, Percent_Identity=26.0387811634349, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI216548445, Length=345, Percent_Identity=24.9275362318841, Blast_Score=67, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6320325, Length=302, Percent_Identity=24.1721854304636, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI19921190, Length=435, Percent_Identity=23.9080459770115, Blast_Score=98, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022923 - InterPro: IPR002905 [H]
Pfam domain/function: PF02005 TRM [H]
EC number: =2.1.1.32 [H]
Molecular weight: Translated: 46064; Mature: 45933
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFAPVSTCLLNGPLGSLEVSCKQSGLNQPTTHYREGSVVLEPGGGFFRPESRPSRDLSV CCCCHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHH LLAAFQQQRREKFSPALRWLDLMAGCGIRALRWGLEAVKPSLLASGVEQLPELWVNDADL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ERASLLERNLAPLRQEQISLKLFHQPAEVLLSRAYLDQCRFDLIDLDCFGCPNAFLQPVL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH QVLASEGFLLLSSSDGRSPTGHDRPGAIRSLAAAARVHPASWEIALRLQLGVLARHAWLL HHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH GRGLEPLVSFSEGRTFRVAVRIKRRISACEESHLGLLARCEACGAQLAQPLLSLQGWSGC HCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC MCSQGGGRWAVSGPLWLGPLQSPVVLADLLVLAEQSIVPIASATLRLLHRLQSDIGLPVY EECCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE CWSTAELAKRLVLSGPPSVLALVRALRFAGHEACGSAVMAGQLRTDATVTELLRICHEMC ECCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCHHHHHCCCCCCHHHHHHHHHHHHHH QEGR HCCC >Mature Secondary Structure GFAPVSTCLLNGPLGSLEVSCKQSGLNQPTTHYREGSVVLEPGGGFFRPESRPSRDLSV CCCHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHH LLAAFQQQRREKFSPALRWLDLMAGCGIRALRWGLEAVKPSLLASGVEQLPELWVNDADL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH ERASLLERNLAPLRQEQISLKLFHQPAEVLLSRAYLDQCRFDLIDLDCFGCPNAFLQPVL HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH QVLASEGFLLLSSSDGRSPTGHDRPGAIRSLAAAARVHPASWEIALRLQLGVLARHAWLL HHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHH GRGLEPLVSFSEGRTFRVAVRIKRRISACEESHLGLLARCEACGAQLAQPLLSLQGWSGC HCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC MCSQGGGRWAVSGPLWLGPLQSPVVLADLLVLAEQSIVPIASATLRLLHRLQSDIGLPVY EECCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE CWSTAELAKRLVLSGPPSVLALVRALRFAGHEACGSAVMAGQLRTDATVTELLRICHEMC ECCHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCHHHHHCCCCCCHHHHHHHHHHHHHH QEGR HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]