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The map label for this gene is recR [H]

Identifier: 33863348

GI number: 33863348

Start: 1163056

End: 1163625

Strand: Reverse

Name: recR [H]

Synonym: PMT1077

Alternate gene names: 33863348

Gene position: 1163625-1163056 (Counterclockwise)

Preceding gene: 33863350

Following gene: 33863347

Centisome position: 48.27

GC content: 52.98

Gene sequence:

>570_bases
TTGATCGACCAGTTCGAGCGTCTGCCTGGGATTGGGCCACGAACGGCCCAGAGACTTGCCCTGCATCTGTTGAGACAACC
AGAAGATCAAATCCGCGCTTTTGCTGATGCACTCCTCGCGGCCCGTTCTCAAGTGGGTCAATGTCAGACCTGTTTTCATC
TCAGCGCGGAGCCTCTTTGCGACATTTGCCGTGATGGCAAGCGATGCGATCAATTGCTTTGTGTGGTGGCTGATTCCCGA
GATCTGTTAGCTCTCGAAAGAACCAGGGAATATAAGGGCCGTTACCACGTTCTCGGCGGACTGATCTCACCAATGGATGG
TATCGGGCCGGACATGCTGCAGATCCCAAGCTTGATTCAACGCGTTGATCGTGATGGCATTAGCGAGGTCATTCTCGCTC
TCACTCCCAGTGTGGAAGGTGACACCACTAGCCTTTATCTGGCACGGTTATTAAAGCCGTTTACTCAAGTGAGTCGAATC
GCCTACGGCCTTCCTGTTGGTAGTGAGTTGGAGTATGCCGACGAAGTTACCCTGACTCGTGCGCTTGAAGGTCGTCGAGC
TATGCAATAA

Upstream 100 bases:

>100_bases
TATGGTCTTGGCTTGATCAACAATTGCCACCTGGTGAACTGCCAAGATTCTGAGTATCTGCGGCGGACCCCTGAGCGGCT
TTACTCGACCCCTGGCTCGC

Downstream 100 bases:

>100_bases
AGCAATGTCTTCCACCCATCGCCCAACCCAATACAGCTCCATTTTGCCTGCGGAGCGCCTTCCGGAATGGTTGCGGCGCC
CCATCGGCAGCGTCTCCCAA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLCDICRDGKRCDQLLCVVADSR
DLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQRVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRI
AYGLPVGSELEYADEVTLTRALEGRRAMQ

Sequences:

>Translated_189_residues
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLCDICRDGKRCDQLLCVVADSR
DLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQRVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRI
AYGLPVGSELEYADEVTLTRALEGRRAMQ
>Mature_189_residues
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLCDICRDGKRCDQLLCVVADSR
DLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQRVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRI
AYGLPVGSELEYADEVTLTRALEGRRAMQ

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=184, Percent_Identity=42.3913043478261, Blast_Score=151, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 20992; Mature: 20992

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLC
CCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
DICRDGKRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQ
HHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
RVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRIAYGLPVGSELEYADEVTLTR
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALEGRRAMQ
HHHHHHCCC
>Mature Secondary Structure
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFADALLAARSQVGQCQTCFHLSAEPLC
CCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
DICRDGKRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQ
HHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
RVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRIAYGLPVGSELEYADEVTLTR
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALEGRRAMQ
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA