| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863299
Identifier: 33863299
GI number: 33863299
Start: 1105428
End: 1105700
Strand: Reverse
Name: 33863299
Synonym: PMT1028
Alternate gene names: NA
Gene position: 1105700-1105428 (Counterclockwise)
Preceding gene: 33863300
Following gene: 33863298
Centisome position: 45.86
GC content: 53.11
Gene sequence:
>273_bases ATGGCGATTAGCGTTACCTCTGCATGTCCACAGAGCACAATTAATGAACTGGGCATCCGGCAATGGCCCATTTGGACATG TGAGGCCAGCACCTTTCCTTGGACCTATGCTGAACAGGAAACCTGCCTGTTGTTGGAAGGCGAGGTGACCGTTAAGCCCG AAGGCGGAAAGCCCGTGCGCTTTGGTGCAGGTGATCTGGTGGTGTTCCCTGCTGGAATGTCATGCATTTGGGAGGTTCAT CAGGCAGTTCGTAAGCACTATCGCTTTGGTTGA
Upstream 100 bases:
>100_bases TCGTCATCTTTAAAGAAACCCGAAGCTTCCGCTCCGTGTTCTTGTTAAACAATTCTCATGTCTGCTACTAGGTTCAAGAG AGCTTCCCTTCGACCCGCCC
Downstream 100 bases:
>100_bases TGAATGAGCTATGACGGCTAGCTGTGAAGTGACCTCGCTGAACACTGGATCAATGCATGGTCTAAGAAATGCAAATGATT CGTTGATTCCTCTCGGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MAISVTSACPQSTINELGIRQWPIWTCEASTFPWTYAEQETCLLLEGEVTVKPEGGKPVRFGAGDLVVFPAGMSCIWEVH QAVRKHYRFG
Sequences:
>Translated_90_residues MAISVTSACPQSTINELGIRQWPIWTCEASTFPWTYAEQETCLLLEGEVTVKPEGGKPVRFGAGDLVVFPAGMSCIWEVH QAVRKHYRFG >Mature_89_residues AISVTSACPQSTINELGIRQWPIWTCEASTFPWTYAEQETCLLLEGEVTVKPEGGKPVRFGAGDLVVFPAGMSCIWEVHQ AVRKHYRFG
Specific function: Unknown
COG id: COG3450
COG function: function code R; Predicted enzyme of the cupin superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10016; Mature: 9884
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISVTSACPQSTINELGIRQWPIWTCEASTFPWTYAEQETCLLLEGEVTVKPEGGKPVR CEEECCCCCCHHHHHHCCCCCCCEEEECCCCCCCEECCCCEEEEECCCEEECCCCCCEEE FGAGDLVVFPAGMSCIWEVHQAVRKHYRFG ECCCCEEEECCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure AISVTSACPQSTINELGIRQWPIWTCEASTFPWTYAEQETCLLLEGEVTVKPEGGKPVR EEECCCCCCHHHHHHCCCCCCCEEEECCCCCCCEECCCCEEEEECCCEEECCCCCCEEE FGAGDLVVFPAGMSCIWEVHQAVRKHYRFG ECCCCEEEECCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA