| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863298
Identifier: 33863298
GI number: 33863298
Start: 1102555
End: 1102797
Strand: Reverse
Name: 33863298
Synonym: PMT1027
Alternate gene names: NA
Gene position: 1102797-1102555 (Counterclockwise)
Preceding gene: 33863299
Following gene: 33863297
Centisome position: 45.74
GC content: 49.79
Gene sequence:
>243_bases ATGAGCCTCCTTTTTGGTGGAGGGCATAATGCAGAAAGCTTGATGAGCGGTGATTCGATGAACGAACCGCAGCCGAAAGA GAGTTTGCTCAAGAAGAGTGGACGAATTGGCGCCATCCTTGGTTTTGCCTGGATTGCTCTGAATATTGTTGTGCCTTTGG CTTTGTTGCGTGTGCCTGCGGTGCAGCGCTGGCTCGTGGCATTTGACAACAAGCTTCCTTTTCATATTCCAGGAATTGGC TAG
Upstream 100 bases:
>100_bases AATAAGCTCTTTCCCTTAGAAATAAAGCTCCCCATCACCCAGGCCCGTCGCGTCACGCGAGGGTCTTTTTTTTGTTGATC AGCCCCCCCATGGGGCTGCA
Downstream 100 bases:
>100_bases CTGCTTTTTGTTTCCGATTGCTGTGGTCCCCATGATTGGAAAGGTGCTCACGCCCTCTCCAAGGTCAATAGCCTTGGACA ACTCATCTGTTTACAGAACA
Product: Signal peptidase I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSLLFGGGHNAESLMSGDSMNEPQPKESLLKKSGRIGAILGFAWIALNIVVPLALLRVPAVQRWLVAFDNKLPFHIPGIG
Sequences:
>Translated_80_residues MSLLFGGGHNAESLMSGDSMNEPQPKESLLKKSGRIGAILGFAWIALNIVVPLALLRVPAVQRWLVAFDNKLPFHIPGIG >Mature_79_residues SLLFGGGHNAESLMSGDSMNEPQPKESLLKKSGRIGAILGFAWIALNIVVPLALLRVPAVQRWLVAFDNKLPFHIPGIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8607; Mature: 8476
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLFGGGHNAESLMSGDSMNEPQPKESLLKKSGRIGAILGFAWIALNIVVPLALLRVPA CCEEECCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VQRWLVAFDNKLPFHIPGIG HHHHHHHHCCCCCEECCCCC >Mature Secondary Structure SLLFGGGHNAESLMSGDSMNEPQPKESLLKKSGRIGAILGFAWIALNIVVPLALLRVPA CEEECCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VQRWLVAFDNKLPFHIPGIG HHHHHHHHCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA