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The map label for this gene is 33863251

Identifier: 33863251

GI number: 33863251

Start: 1059401

End: 1060990

Strand: Reverse

Name: 33863251

Synonym: PMT0980

Alternate gene names: NA

Gene position: 1060990-1059401 (Counterclockwise)

Preceding gene: 33863252

Following gene: 33863250

Centisome position: 44.01

GC content: 44.72

Gene sequence:

>1590_bases
ATGTCAATTCGGCGTTCCCTCCACACTTCAACAGTGGTTTTGCAGCTGGCCAGCTTTTTGGCAGTGCCACAAAGCCTTGC
GCAGACAGAAAAATCAAACGAATTATTGACTAGCAATACTTCCAATATTGATTCAACATATCTTGTTGATGAATTGGATC
GCTTGCAGAATCGTGTCAAGCGAAATTCTATGCCGATTACACTCAATGAAGCTATCGTTATTGGGATTACTAACAATCCA
GAACTGCTTCAAACATTTGGTGCGATTCAGCAATACGAATGGTCTTTGATTGCTGCACAAAGACGCTGGTATCCTCAATT
ACAATTATCCAATGGATCTCCATTCATTGGTTACAGCTGGGGAACTTACATTAACAATCAATATGGTATGCGTGGAAACA
GAGCTTCATCAACCACTCTAAGCTCTAACTCACTCTATTCAGTAAACAAGAGCCAATCATTTCTACTCCAGCCTGGAGCG
ATAGTGAGCTGGAACTTCATTGATCCAACGCGACAGCCTGATATCAACGCAGCATCTGAATCACTCAAGCAACAAAAATT
ACTTTTTAATGTAAGCACCCGTAATCTCATCCTCAACCTTCAGCAGAGCTACTACGGCATTCAAAGTAGCCAACAGCTCA
TTAATAGCTTTAAACAGATTTATGCGATTAATAAACAACAACTCAAGATGCTAGAAGCTCAAAAAAATATCGGGATGGCG
ACTGTGCTTGATGTTGAGCAAACTAAGTCTCAGCTTTTTACTCAACTCAGCCAACTAGTTAGCTATACCCAGGAATACAT
CAAGCAAACTGCTTTATTAGCAGAATACCTAGCACTACCACCAGGAAAACTCGCCATCCCTAGTGATCCAGCCGCTCGTG
CAGGGAGTTGGAGTGAAACCCTTCAAGAAACCCTCAAAAACGCACTCAAGCAACGTGAAGAGATTCTTGCCAGCCTTGCT
GCCGCTGAATCAGCTCAATGGAGAGGTATCGCCTCTATACGCAGCTACCTGCCAGTTTTTCAACTTATGGGAACTGGATC
ACTGAACTCCAGCAATGGTTACTCATCCGTCCCTGTCGATGATGATCCTGGGAGCGCTTACCATTGGACTCGGACATGGA
CAGCTACTGTCGGGATCGGCTTCTCATGGTCTTTGTTCGATGGCGGCATTAATGCAGCAAATGCTGAATCTTTTTATGCG
CAGAGCCGTCAACAAAAAGCCCAAGCAGCCCAAACGGAACTAACTGTTGTTCGTCAAGTACGAAGCAGCTTTGCTGAAAT
GCAAACATCACGCGTAGCCATTGCAAGTGCCCAAAGGGCTTATGAAAGTGCAAAGCTCGCGCAAGAGGTCGCTCGAGTGC
GCTGGGCTGCTGGGGTAGGTGATATCACCAGCGTTGTACAGACCATTCAACAGCTTTCTATAGCTGCACAACAATCCTCG
CAAGCGATACTTAGTTACAATAATGCTGTTGCTGAAATCTATCGCTACTCAGCCACATGGCCTGGTAGTACCGAGAAGGA
TGTACAGATGCGTTTAAGAATGATGCGTAATCCATCGAGCAATCCTAAAAACTCCTCTCTAATACCTTGA

Upstream 100 bases:

>100_bases
ATTGACTAACACAACTAGGCGTTAGAAAAACTTGCAGAGTTGTCAAAAAGCTCCATAATGCGCTTGAAATCCTGACAATT
ACCTGGGTGGCAACCTATAG

Downstream 100 bases:

>100_bases
CTAATCCCTTTAACAAACGCGCTTTGCTAAAGCGCTATCAAGTTGGTGATCGCAACCCACCAATTACATTATTGACACCA
CCTTTAAAGGTTACTTTGGG

Product: Outer membrane efflux protein

Products: NA

Alternate protein names: RND Family Outer Membrane Efflux Protein

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSIRRSLHTSTVVLQLASFLAVPQSLAQTEKSNELLTSNTSNIDSTYLVDELDRLQNRVKRNSMPITLNEAIVIGITNNP
ELLQTFGAIQQYEWSLIAAQRRWYPQLQLSNGSPFIGYSWGTYINNQYGMRGNRASSTTLSSNSLYSVNKSQSFLLQPGA
IVSWNFIDPTRQPDINAASESLKQQKLLFNVSTRNLILNLQQSYYGIQSSQQLINSFKQIYAINKQQLKMLEAQKNIGMA
TVLDVEQTKSQLFTQLSQLVSYTQEYIKQTALLAEYLALPPGKLAIPSDPAARAGSWSETLQETLKNALKQREEILASLA
AAESAQWRGIASIRSYLPVFQLMGTGSLNSSNGYSSVPVDDDPGSAYHWTRTWTATVGIGFSWSLFDGGINAANAESFYA
QSRQQKAQAAQTELTVVRQVRSSFAEMQTSRVAIASAQRAYESAKLAQEVARVRWAAGVGDITSVVQTIQQLSIAAQQSS
QAILSYNNAVAEIYRYSATWPGSTEKDVQMRLRMMRNPSSNPKNSSLIP

Sequences:

>Translated_529_residues
MSIRRSLHTSTVVLQLASFLAVPQSLAQTEKSNELLTSNTSNIDSTYLVDELDRLQNRVKRNSMPITLNEAIVIGITNNP
ELLQTFGAIQQYEWSLIAAQRRWYPQLQLSNGSPFIGYSWGTYINNQYGMRGNRASSTTLSSNSLYSVNKSQSFLLQPGA
IVSWNFIDPTRQPDINAASESLKQQKLLFNVSTRNLILNLQQSYYGIQSSQQLINSFKQIYAINKQQLKMLEAQKNIGMA
TVLDVEQTKSQLFTQLSQLVSYTQEYIKQTALLAEYLALPPGKLAIPSDPAARAGSWSETLQETLKNALKQREEILASLA
AAESAQWRGIASIRSYLPVFQLMGTGSLNSSNGYSSVPVDDDPGSAYHWTRTWTATVGIGFSWSLFDGGINAANAESFYA
QSRQQKAQAAQTELTVVRQVRSSFAEMQTSRVAIASAQRAYESAKLAQEVARVRWAAGVGDITSVVQTIQQLSIAAQQSS
QAILSYNNAVAEIYRYSATWPGSTEKDVQMRLRMMRNPSSNPKNSSLIP
>Mature_528_residues
SIRRSLHTSTVVLQLASFLAVPQSLAQTEKSNELLTSNTSNIDSTYLVDELDRLQNRVKRNSMPITLNEAIVIGITNNPE
LLQTFGAIQQYEWSLIAAQRRWYPQLQLSNGSPFIGYSWGTYINNQYGMRGNRASSTTLSSNSLYSVNKSQSFLLQPGAI
VSWNFIDPTRQPDINAASESLKQQKLLFNVSTRNLILNLQQSYYGIQSSQQLINSFKQIYAINKQQLKMLEAQKNIGMAT
VLDVEQTKSQLFTQLSQLVSYTQEYIKQTALLAEYLALPPGKLAIPSDPAARAGSWSETLQETLKNALKQREEILASLAA
AESAQWRGIASIRSYLPVFQLMGTGSLNSSNGYSSVPVDDDPGSAYHWTRTWTATVGIGFSWSLFDGGINAANAESFYAQ
SRQQKAQAAQTELTVVRQVRSSFAEMQTSRVAIASAQRAYESAKLAQEVARVRWAAGVGDITSVVQTIQQLSIAAQQSSQ
AILSYNNAVAEIYRYSATWPGSTEKDVQMRLRMMRNPSSNPKNSSLIP

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58643; Mature: 58511

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRRSLHTSTVVLQLASFLAVPQSLAQTEKSNELLTSNTSNIDSTYLVDELDRLQNRVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHH
RNSMPITLNEAIVIGITNNPELLQTFGAIQQYEWSLIAAQRRWYPQLQLSNGSPFIGYSW
HCCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECC
GTYINNQYGMRGNRASSTTLSSNSLYSVNKSQSFLLQPGAIVSWNFIDPTRQPDINAASE
CCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCEEECCCCEEEEECCCCCCCCCCCHHHH
SLKQQKLLFNVSTRNLILNLQQSYYGIQSSQQLINSFKQIYAINKQQLKMLEAQKNIGMA
HHHHHHHHEEECHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEE
TVLDVEQTKSQLFTQLSQLVSYTQEYIKQTALLAEYLALPPGKLAIPSDPAARAGSWSET
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHH
LQETLKNALKQREEILASLAAAESAQWRGIASIRSYLPVFQLMGTGSLNSSNGYSSVPVD
HHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DDPGSAYHWTRTWTATVGIGFSWSLFDGGINAANAESFYAQSRQQKAQAAQTELTVVRQV
CCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSSFAEMQTSRVAIASAQRAYESAKLAQEVARVRWAAGVGDITSVVQTIQQLSIAAQQSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
QAILSYNNAVAEIYRYSATWPGSTEKDVQMRLRMMRNPSSNPKNSSLIP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SIRRSLHTSTVVLQLASFLAVPQSLAQTEKSNELLTSNTSNIDSTYLVDELDRLQNRVK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHH
RNSMPITLNEAIVIGITNNPELLQTFGAIQQYEWSLIAAQRRWYPQLQLSNGSPFIGYSW
HCCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECC
GTYINNQYGMRGNRASSTTLSSNSLYSVNKSQSFLLQPGAIVSWNFIDPTRQPDINAASE
CCCCCCCCCCCCCCCCCCEECCCCEEEECCCCCEEECCCCEEEEECCCCCCCCCCCHHHH
SLKQQKLLFNVSTRNLILNLQQSYYGIQSSQQLINSFKQIYAINKQQLKMLEAQKNIGMA
HHHHHHHHEEECHHHHEEEEHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEE
TVLDVEQTKSQLFTQLSQLVSYTQEYIKQTALLAEYLALPPGKLAIPSDPAARAGSWSET
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHH
LQETLKNALKQREEILASLAAAESAQWRGIASIRSYLPVFQLMGTGSLNSSNGYSSVPVD
HHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DDPGSAYHWTRTWTATVGIGFSWSLFDGGINAANAESFYAQSRQQKAQAAQTELTVVRQV
CCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSSFAEMQTSRVAIASAQRAYESAKLAQEVARVRWAAGVGDITSVVQTIQQLSIAAQQSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
QAILSYNNAVAEIYRYSATWPGSTEKDVQMRLRMMRNPSSNPKNSSLIP
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA