| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863250
Identifier: 33863250
GI number: 33863250
Start: 1058001
End: 1059299
Strand: Reverse
Name: 33863250
Synonym: PMT0979
Alternate gene names: NA
Gene position: 1059299-1058001 (Counterclockwise)
Preceding gene: 33863251
Following gene: 33863249
Centisome position: 43.94
GC content: 46.65
Gene sequence:
>1299_bases ATGGGTCTGCTGATTGCCATCGGCGGAGCTCTGTGGGCCACCTTGGCACGTATTCCTTTGAGCGTAGAAGGCACAGGCGT GCTACTGCCAGTGAGTACAATTAATAGCAGCATCAGCGGTACCAACGGCAATGCTATTTGGATGTTTAATCAACCAAAAC AGCAATGGCATCTATCGGCCAAACGTTTCAAAAATCGGCCTGGTCAATTTAATAATCGGCAAATGACTGAGCTGGCGACC AATATCCTTAATGCCATCGATAAAAAACATTCAGAAAAAATATCAATGGCTAAAAATTCATCTGCTGAAAATTTCACAGA AAAACTTAAACAAACCTTTTATGGACAGAAAGTCCCTGCAGGTCAACTAATGCTTTGGATTCAATCATCTGCTCAGCATG AGCAACTCCATAGTGAGCTTGATCAACTCAAGAGAACACTCCGCGATACCCTGGCTCAACAGAATAATATCAATTCCAAG CAATCAATCCTTCGTGAAGAACTTGCTAGACGCTCCTCTTATCTTGCCCAGATGCAAAAACTTGAAAGCAAGGGATATGT GACACGTGCAGCGATTCTGCAGGAACAAGCTCAGGTTGACAATCTTCGCTCTCAGATTTATAGCAACAAAAATGAGTTGA TTAACCTTAGTAATCAACTTGATCAGTCTTATCAGAAATTGGGTAACACACTTTCAAATCTTATTAACCAGCAGATGATC TTTGCCTCGGATGATGTTTATTTGACACAAGTCATCCCAAACAACGGTGAAAGTGTCATCCAGGGTCAAGTTGTACTGCA ATTGAGTGATGATTCACTCAATAGTCCCATATTAGTGCCGGTGTTTCTCGGCTCCAGGGAAATGGCCCAGGTGTTCCCAG GCATGGACGCTCTAGCTACTCCAGAGGGTTATAAACGATCGGAAGTTGGGGGCATCCGTGGGCGCGTAGTGTCGATGGCC CAAGTGCCAAGCGGGCTAGAAGATGTCCATGCCCGTGTAGGACTGAAATCGCTGGCCCAAGTGATCACAAATCGCGAGCC ATCTCCAACCCTTGCAGTCTTGGCGCTTGAGCGCAGTGGAGAGACCTCCCCCTTGAACAGCGGTGGTTACCGCTGGAGTT CAAGAGGCGATCTGCCATTCCCTCCGACCCCCGGTGATCGCCTTTCTGTGCAGATCACCACCCGATACGTTGCTCCTATC GAAATGGTGCTTCCTAGTTTCCGTTATTTCTTTGGCATGAGTCCGCCAGACAGACCACACCTGCTACCTAACAACAACAG GCAACAAATAAACGAATGA
Upstream 100 bases:
>100_bases TAATCCCTTTAACAAACGCGCTTTGCTAAAGCGCTATCAAGTTGGTGATCGCAACCCACCAATTACATTATTGACACCAC CTTTAAAGGTTACTTTGGGA
Downstream 100 bases:
>100_bases AGAAACTGCAGCGGAAGCGCGTCAAGGCCCAAGCACGGCTGCAATACGAAGCAACTGAATGTGGCGCCGCTTCGCTTGCC ACGATCCTCGCTTACTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MGLLIAIGGALWATLARIPLSVEGTGVLLPVSTINSSISGTNGNAIWMFNQPKQQWHLSAKRFKNRPGQFNNRQMTELAT NILNAIDKKHSEKISMAKNSSAENFTEKLKQTFYGQKVPAGQLMLWIQSSAQHEQLHSELDQLKRTLRDTLAQQNNINSK QSILREELARRSSYLAQMQKLESKGYVTRAAILQEQAQVDNLRSQIYSNKNELINLSNQLDQSYQKLGNTLSNLINQQMI FASDDVYLTQVIPNNGESVIQGQVVLQLSDDSLNSPILVPVFLGSREMAQVFPGMDALATPEGYKRSEVGGIRGRVVSMA QVPSGLEDVHARVGLKSLAQVITNREPSPTLAVLALERSGETSPLNSGGYRWSSRGDLPFPPTPGDRLSVQITTRYVAPI EMVLPSFRYFFGMSPPDRPHLLPNNNRQQINE
Sequences:
>Translated_432_residues MGLLIAIGGALWATLARIPLSVEGTGVLLPVSTINSSISGTNGNAIWMFNQPKQQWHLSAKRFKNRPGQFNNRQMTELAT NILNAIDKKHSEKISMAKNSSAENFTEKLKQTFYGQKVPAGQLMLWIQSSAQHEQLHSELDQLKRTLRDTLAQQNNINSK QSILREELARRSSYLAQMQKLESKGYVTRAAILQEQAQVDNLRSQIYSNKNELINLSNQLDQSYQKLGNTLSNLINQQMI FASDDVYLTQVIPNNGESVIQGQVVLQLSDDSLNSPILVPVFLGSREMAQVFPGMDALATPEGYKRSEVGGIRGRVVSMA QVPSGLEDVHARVGLKSLAQVITNREPSPTLAVLALERSGETSPLNSGGYRWSSRGDLPFPPTPGDRLSVQITTRYVAPI EMVLPSFRYFFGMSPPDRPHLLPNNNRQQINE >Mature_431_residues GLLIAIGGALWATLARIPLSVEGTGVLLPVSTINSSISGTNGNAIWMFNQPKQQWHLSAKRFKNRPGQFNNRQMTELATN ILNAIDKKHSEKISMAKNSSAENFTEKLKQTFYGQKVPAGQLMLWIQSSAQHEQLHSELDQLKRTLRDTLAQQNNINSKQ SILREELARRSSYLAQMQKLESKGYVTRAAILQEQAQVDNLRSQIYSNKNELINLSNQLDQSYQKLGNTLSNLINQQMIF ASDDVYLTQVIPNNGESVIQGQVVLQLSDDSLNSPILVPVFLGSREMAQVFPGMDALATPEGYKRSEVGGIRGRVVSMAQ VPSGLEDVHARVGLKSLAQVITNREPSPTLAVLALERSGETSPLNSGGYRWSSRGDLPFPPTPGDRLSVQITTRYVAPIE MVLPSFRYFFGMSPPDRPHLLPNNNRQQINE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48008; Mature: 47877
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLIAIGGALWATLARIPLSVEGTGVLLPVSTINSSISGTNGNAIWMFNQPKQQWHLSA CCEEEEEHHHHHHHHHHCCEEECCCEEEEEHHHHCCCCCCCCCCEEEEECCCHHHHHHHH KRFKNRPGQFNNRQMTELATNILNAIDKKHSEKISMAKNSSAENFTEKLKQTFYGQKVPA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC GQLMLWIQSSAQHEQLHSELDQLKRTLRDTLAQQNNINSKQSILREELARRSSYLAQMQK CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LESKGYVTRAAILQEQAQVDNLRSQIYSNKNELINLSNQLDQSYQKLGNTLSNLINQQMI HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHEE FASDDVYLTQVIPNNGESVIQGQVVLQLSDDSLNSPILVPVFLGSREMAQVFPGMDALAT EECCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCHHHHHHCCCCCCCCC PEGYKRSEVGGIRGRVVSMAQVPSGLEDVHARVGLKSLAQVITNREPSPTLAVLALERSG CCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC ETSPLNSGGYRWSSRGDLPFPPTPGDRLSVQITTRYVAPIEMVLPSFRYFFGMSPPDRPH CCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC LLPNNNRQQINE CCCCCCHHCCCC >Mature Secondary Structure GLLIAIGGALWATLARIPLSVEGTGVLLPVSTINSSISGTNGNAIWMFNQPKQQWHLSA CEEEEEHHHHHHHHHHCCEEECCCEEEEEHHHHCCCCCCCCCCEEEEECCCHHHHHHHH KRFKNRPGQFNNRQMTELATNILNAIDKKHSEKISMAKNSSAENFTEKLKQTFYGQKVPA HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC GQLMLWIQSSAQHEQLHSELDQLKRTLRDTLAQQNNINSKQSILREELARRSSYLAQMQK CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LESKGYVTRAAILQEQAQVDNLRSQIYSNKNELINLSNQLDQSYQKLGNTLSNLINQQMI HHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHHHHHHHHHHHHHHEE FASDDVYLTQVIPNNGESVIQGQVVLQLSDDSLNSPILVPVFLGSREMAQVFPGMDALAT EECCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCEEEEEEECCHHHHHHCCCCCCCCC PEGYKRSEVGGIRGRVVSMAQVPSGLEDVHARVGLKSLAQVITNREPSPTLAVLALERSG CCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC ETSPLNSGGYRWSSRGDLPFPPTPGDRLSVQITTRYVAPIEMVLPSFRYFFGMSPPDRPH CCCCCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC LLPNNNRQQINE CCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA