| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ptxB [H]
Identifier: 33863052
GI number: 33863052
Start: 855102
End: 856001
Strand: Direct
Name: ptxB [H]
Synonym: PMT0780
Alternate gene names: 33863052
Gene position: 855102-856001 (Clockwise)
Preceding gene: 33863051
Following gene: 33863053
Centisome position: 35.47
GC content: 44.89
Gene sequence:
>900_bases ATGCCTTCAAGACCAGGCGGGGCGTTGGTCCGCACTGCATTGATCTGCTTGATTGGGTTGCTGAGCTGCACCAATCAAAC TGAGAAGACACTTCGTATTGGGGCAATTCCCGATCAGAATCCTGAGCGTTTGAACCGTTTATACGGCCTACTCTCGTCTG AACTGAGCAAAGAATTAAATGTTCCCGTTCGCTACAAAGCAGTCACGAACTATCCAGCCGCAGTCAGTGCATTCCGCACC GACAGCCTTGATCTTGTTTGGTTTGGAGGCCTAACAGGTGTACAAGCTAGGTTGCAAAAGCCAGGAGCAGAAGTTATCGC GCAAAGAGATATTGATGCCAAATTCACAAGTGTATTCATAGCCAATACAAAGAGCGGAATTAAGCCATTAAAAAGCCAAT CTGGGCTTCAGCAACTTAATGGGAAGCGGTTCACTTTTGGCTCCGAAAGTTCAACCTCTGGAAGATTAATGCCTCAGCAC TTCCTTCAGCAAGCAGGTGTGCAAATGAATGATTTTTCTGGAGGCAAACCAGGTTTCAGTGGTAGTCATGATGCAACAAT TGCTTTGGTGCAAAGTGGTTCTTTTGATGCTGGCGCCCTGAACGAAAGTGTATGGGAGTCGGCTCAGAAAAATGGCCGCA TCGATCCAGCCAAAGTGAAAGTGATTTGGAGAACGCCCCCATATGCAGACTATCACTGGCTAGCACAACCCAATCTCGAT AAAAAGTTTGGCGATGGTTTCACTGAAAAACTAAAGTCTACTCTAACTGGGTTAAAGAAAAGTTCAAAATCACAAGAAAA AATACTTGAACTTTTAGGGGCAAGTAGCTTTGTAGATGCAGACCAAAATCAATACATAACAATCGAGAAAATAGGCAGGC AACTAGGAAAGATTCAGTGA
Upstream 100 bases:
>100_bases GCCTCACCTGTGCGGTTTCACCAGAAACGATTTGCGATGGACTAGAACGTCTCCGCAAAGCTCTCAAACAGAGCTGAACA ACAAACGCAACAAAGACAAC
Downstream 100 bases:
>100_bases GAAGATTACTCGAAATAAGGGGCGTATTTGTACACAGTAGTAGAGGGAATCGGCTTAATGATATCAACCTTAGCATTTCT TCTGGAGAGCGTGTTGCACT
Product: phosphonate ABC transporter phosphonate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MPSRPGGALVRTALICLIGLLSCTNQTEKTLRIGAIPDQNPERLNRLYGLLSSELSKELNVPVRYKAVTNYPAAVSAFRT DSLDLVWFGGLTGVQARLQKPGAEVIAQRDIDAKFTSVFIANTKSGIKPLKSQSGLQQLNGKRFTFGSESSTSGRLMPQH FLQQAGVQMNDFSGGKPGFSGSHDATIALVQSGSFDAGALNESVWESAQKNGRIDPAKVKVIWRTPPYADYHWLAQPNLD KKFGDGFTEKLKSTLTGLKKSSKSQEKILELLGASSFVDADQNQYITIEKIGRQLGKIQ
Sequences:
>Translated_299_residues MPSRPGGALVRTALICLIGLLSCTNQTEKTLRIGAIPDQNPERLNRLYGLLSSELSKELNVPVRYKAVTNYPAAVSAFRT DSLDLVWFGGLTGVQARLQKPGAEVIAQRDIDAKFTSVFIANTKSGIKPLKSQSGLQQLNGKRFTFGSESSTSGRLMPQH FLQQAGVQMNDFSGGKPGFSGSHDATIALVQSGSFDAGALNESVWESAQKNGRIDPAKVKVIWRTPPYADYHWLAQPNLD KKFGDGFTEKLKSTLTGLKKSSKSQEKILELLGASSFVDADQNQYITIEKIGRQLGKIQ >Mature_298_residues PSRPGGALVRTALICLIGLLSCTNQTEKTLRIGAIPDQNPERLNRLYGLLSSELSKELNVPVRYKAVTNYPAAVSAFRTD SLDLVWFGGLTGVQARLQKPGAEVIAQRDIDAKFTSVFIANTKSGIKPLKSQSGLQQLNGKRFTFGSESSTSGRLMPQHF LQQAGVQMNDFSGGKPGFSGSHDATIALVQSGSFDAGALNESVWESAQKNGRIDPAKVKVIWRTPPYADYHWLAQPNLDK KFGDGFTEKLKSTLTGLKKSSKSQEKILELLGASSFVDADQNQYITIEKIGRQLGKIQ
Specific function: Probably forms part of a binding-protein-dependent phosphite transporter. Required for oxidation of phosphite to phosphate [H]
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR005770 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 32561; Mature: 32430
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRPGGALVRTALICLIGLLSCTNQTEKTLRIGAIPDQNPERLNRLYGLLSSELSKELN CCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC VPVRYKAVTNYPAAVSAFRTDSLDLVWFGGLTGVQARLQKPGAEVIAQRDIDAKFTSVFI CCEEEEEECCCCHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHHHCCCCCCEEEEEE ANTKSGIKPLKSQSGLQQLNGKRFTFGSESSTSGRLMPQHFLQQAGVQMNDFSGGKPGFS ECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCEECCCCCCCCCCC GSHDATIALVQSGSFDAGALNESVWESAQKNGRIDPAKVKVIWRTPPYADYHWLAQPNLD CCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCC KKFGDGFTEKLKSTLTGLKKSSKSQEKILELLGASSFVDADQNQYITIEKIGRQLGKIQ HHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCCCCCEEEHHHHHHHHCCCC >Mature Secondary Structure PSRPGGALVRTALICLIGLLSCTNQTEKTLRIGAIPDQNPERLNRLYGLLSSELSKELN CCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC VPVRYKAVTNYPAAVSAFRTDSLDLVWFGGLTGVQARLQKPGAEVIAQRDIDAKFTSVFI CCEEEEEECCCCHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHHHHCCCCCCEEEEEE ANTKSGIKPLKSQSGLQQLNGKRFTFGSESSTSGRLMPQHFLQQAGVQMNDFSGGKPGFS ECCCCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCCCEECCCCCCCCCCC GSHDATIALVQSGSFDAGALNESVWESAQKNGRIDPAKVKVIWRTPPYADYHWLAQPNLD CCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEECCCCCCC KKFGDGFTEKLKSTLTGLKKSSKSQEKILELLGASSFVDADQNQYITIEKIGRQLGKIQ HHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCCCCCEEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9791102 [H]