| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is aspC [H]
Identifier: 33863051
GI number: 33863051
Start: 853900
End: 855078
Strand: Direct
Name: aspC [H]
Synonym: PMT0779
Alternate gene names: 33863051
Gene position: 853900-855078 (Clockwise)
Preceding gene: 33863047
Following gene: 33863052
Centisome position: 35.42
GC content: 52.67
Gene sequence:
>1179_bases ATGCCACTCCCGCCTCATCTTTCCGACCGAGTCGTTGCCCTTCAGCCCTCACTCACACTGGCAATCAGTGCTCGAGCAAA GGCCCTTCAGCAAGAAGGCCGCGACATCTGCAGCCTGAGTGCTGGTGAGCCAGATTTCAATACCCCTGAATTCATCATTG ATGCCACGGTGAAGGCACTCCGTGATGGCATCACCCGTTATGGCCCTGCCGCCGGAGATCCCGAACTCCGTGAGGCAATA GCAACCAAGCTCAGCAAAGAAAACACTGTGCCAACCAATGCAGAGCAAGTGTTGGTGACAAATGGAGGCAAGCAAGCAAT CTTTAACTTGTTTCAGGTGATCCTCAATCCGGGCGATGAGGTTTTAATCCCTGCTCCTTATTGGCTGAGTTATCCAGAAA TGGCCCGCTTAGCTGGTGCAAAGGTGACAACACTTCCCTCCACTCCAGAAAACGGTTTCTGCCTAGATCTCAACAACCTA GAAGCCTCCATCGGCCCTAAAACCCGTCTTTTATTACTTAATTCCCCTGGCAACCCAACCGGCCGTGTGATGGCACGCAA GGAGCTGGAAACATTGGCTGATCTGCTGAGAGATCATCCCCAGATCCTGGTCATGAGTGATGAGATCTACGAGTTCATTC TTGAAGAAGGGCAACAGCATTACAGCTTCTCGGCCATAGCACCAGATCTTTCAAACAGAACCTTCATCGTTAACGGCTTT GCCAAGGGCTGGGCAATGACCGGTTGGCGTTTGGGTTATCTAGCCGGCCCCGCTGATGCTGTAAAAGCTGCTACTGCCCT CCAAAGCCAGAGCACTAGCAATGTCTGCAGTTTCGCTCAGCGTGGAGCCTTGGCCGCGCTGCAAGGCTCAAGGGAGTGTG TGAAAAAGATGGTCAAGAGCTACAACACCCGCCGCGAACTCCTCACCTCTGGCTTGCTTAGCCTTGAGGGAATGAGCCTG GTTCCTCCAAAAGGTGCCTTTTACGCCTTCCCAAAACTGCCACCTGAAAGCCTCGACTCAGTAAGTTTCTGTGAGCAAGC TCTTGAAAACCATGGGCTTGCGATGGTTCCAGGTGCAGCATTTGGAGACGACAGTTGCGTACGCCTCACCTGTGCGGTTT CACCAGAAACGATTTGCGATGGACTAGAACGTCTCCGCAAAGCTCTCAAACAGAGCTGA
Upstream 100 bases:
>100_bases ATGAGCATTAAAAAGCCAATCGAAAGATGTTGGTTGTCCATGTCAGAGCATCAGGCAAGATATGGTCCTTACGGGCATCC CGCAAGGGGATGCGGCACCA
Downstream 100 bases:
>100_bases ACAACAAACGCAACAAAGACAACATGCCTTCAAGACCAGGCGGGGCGTTGGTCCGCACTGCATTGATCTGCTTGATTGGG TTGCTGAGCTGCACCAATCA
Product: aminotransferase class-I
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPLPPHLSDRVVALQPSLTLAISARAKALQQEGRDICSLSAGEPDFNTPEFIIDATVKALRDGITRYGPAAGDPELREAI ATKLSKENTVPTNAEQVLVTNGGKQAIFNLFQVILNPGDEVLIPAPYWLSYPEMARLAGAKVTTLPSTPENGFCLDLNNL EASIGPKTRLLLLNSPGNPTGRVMARKELETLADLLRDHPQILVMSDEIYEFILEEGQQHYSFSAIAPDLSNRTFIVNGF AKGWAMTGWRLGYLAGPADAVKAATALQSQSTSNVCSFAQRGALAALQGSRECVKKMVKSYNTRRELLTSGLLSLEGMSL VPPKGAFYAFPKLPPESLDSVSFCEQALENHGLAMVPGAAFGDDSCVRLTCAVSPETICDGLERLRKALKQS
Sequences:
>Translated_392_residues MPLPPHLSDRVVALQPSLTLAISARAKALQQEGRDICSLSAGEPDFNTPEFIIDATVKALRDGITRYGPAAGDPELREAI ATKLSKENTVPTNAEQVLVTNGGKQAIFNLFQVILNPGDEVLIPAPYWLSYPEMARLAGAKVTTLPSTPENGFCLDLNNL EASIGPKTRLLLLNSPGNPTGRVMARKELETLADLLRDHPQILVMSDEIYEFILEEGQQHYSFSAIAPDLSNRTFIVNGF AKGWAMTGWRLGYLAGPADAVKAATALQSQSTSNVCSFAQRGALAALQGSRECVKKMVKSYNTRRELLTSGLLSLEGMSL VPPKGAFYAFPKLPPESLDSVSFCEQALENHGLAMVPGAAFGDDSCVRLTCAVSPETICDGLERLRKALKQS >Mature_391_residues PLPPHLSDRVVALQPSLTLAISARAKALQQEGRDICSLSAGEPDFNTPEFIIDATVKALRDGITRYGPAAGDPELREAIA TKLSKENTVPTNAEQVLVTNGGKQAIFNLFQVILNPGDEVLIPAPYWLSYPEMARLAGAKVTTLPSTPENGFCLDLNNLE ASIGPKTRLLLLNSPGNPTGRVMARKELETLADLLRDHPQILVMSDEIYEFILEEGQQHYSFSAIAPDLSNRTFIVNGFA KGWAMTGWRLGYLAGPADAVKAATALQSQSTSNVCSFAQRGALAALQGSRECVKKMVKSYNTRRELLTSGLLSLEGMSLV PPKGAFYAFPKLPPESLDSVSFCEQALENHGLAMVPGAAFGDDSCVRLTCAVSPETICDGLERLRKALKQS
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=398, Percent_Identity=27.6381909547739, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI169881279, Length=398, Percent_Identity=27.6381909547739, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI56713254, Length=392, Percent_Identity=28.0612244897959, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI56713256, Length=392, Percent_Identity=28.0612244897959, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI4507369, Length=388, Percent_Identity=25, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI169881281, Length=306, Percent_Identity=26.1437908496732, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI149944424, Length=236, Percent_Identity=28.3898305084746, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI4885351, Length=384, Percent_Identity=22.65625, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI215599424, Length=379, Percent_Identity=23.2189973614776, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI19263340, Length=379, Percent_Identity=23.2189973614776, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI187936925, Length=357, Percent_Identity=24.6498599439776, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI14211921, Length=357, Percent_Identity=24.6498599439776, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI7705897, Length=416, Percent_Identity=23.7980769230769, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI33469970, Length=416, Percent_Identity=23.7980769230769, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1786816, Length=378, Percent_Identity=29.8941798941799, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1788722, Length=387, Percent_Identity=28.9405684754522, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1788627, Length=353, Percent_Identity=28.0453257790368, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1790797, Length=368, Percent_Identity=24.7282608695652, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787909, Length=375, Percent_Identity=24, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17567663, Length=370, Percent_Identity=26.4864864864865, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71994476, Length=406, Percent_Identity=26.6009852216749, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71994472, Length=406, Percent_Identity=26.6009852216749, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17567369, Length=400, Percent_Identity=24.25, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71981209, Length=362, Percent_Identity=22.6519337016575, Blast_Score=88, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6322401, Length=320, Percent_Identity=29.0625, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6320317, Length=340, Percent_Identity=23.2352941176471, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28573069, Length=354, Percent_Identity=24.5762711864407, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24646114, Length=354, Percent_Identity=24.5762711864407, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI28573067, Length=354, Percent_Identity=24.5762711864407, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI28573065, Length=354, Percent_Identity=24.5762711864407, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI45551451, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641770, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641760, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641768, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641766, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24641764, Length=341, Percent_Identity=25.8064516129032, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI18859735, Length=366, Percent_Identity=23.4972677595628, Blast_Score=88, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 42274; Mature: 42143
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPPHLSDRVVALQPSLTLAISARAKALQQEGRDICSLSAGEPDFNTPEFIIDATVKAL CCCCCCCCCCEEEECCCEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH RDGITRYGPAAGDPELREAIATKLSKENTVPTNAEQVLVTNGGKQAIFNLFQVILNPGDE HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC VLIPAPYWLSYPEMARLAGAKVTTLPSTPENGFCLDLNNLEASIGPKTRLLLLNSPGNPT EEECCCHHCCCHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCH GRVMARKELETLADLLRDHPQILVMSDEIYEFILEEGQQHYSFSAIAPDLSNRTFIVNGF HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHEEEHEECCCCCCCEEEEECC AKGWAMTGWRLGYLAGPADAVKAATALQSQSTSNVCSFAQRGALAALQGSRECVKKMVKS CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHH YNTRRELLTSGLLSLEGMSLVPPKGAFYAFPKLPPESLDSVSFCEQALENHGLAMVPGAA HHHHHHHHHHHHHHCCCCEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCC FGDDSCVRLTCAVSPETICDGLERLRKALKQS CCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLPPHLSDRVVALQPSLTLAISARAKALQQEGRDICSLSAGEPDFNTPEFIIDATVKAL CCCCCCCCCEEEECCCEEEEEHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHH RDGITRYGPAAGDPELREAIATKLSKENTVPTNAEQVLVTNGGKQAIFNLFQVILNPGDE HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCC VLIPAPYWLSYPEMARLAGAKVTTLPSTPENGFCLDLNNLEASIGPKTRLLLLNSPGNPT EEECCCHHCCCHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCH GRVMARKELETLADLLRDHPQILVMSDEIYEFILEEGQQHYSFSAIAPDLSNRTFIVNGF HHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHEEEHEECCCCCCCEEEEECC AKGWAMTGWRLGYLAGPADAVKAATALQSQSTSNVCSFAQRGALAALQGSRECVKKMVKS CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHH YNTRRELLTSGLLSLEGMSLVPPKGAFYAFPKLPPESLDSVSFCEQALENHGLAMVPGAA HHHHHHHHHHHHHHCCCCEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCC FGDDSCVRLTCAVSPETICDGLERLRKALKQS CCCCCEEEEEEECCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]