| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862983
Identifier: 33862983
GI number: 33862983
Start: 767416
End: 769113
Strand: Direct
Name: 33862983
Synonym: PMT0711
Alternate gene names: NA
Gene position: 767416-769113 (Clockwise)
Preceding gene: 33862981
Following gene: 33862984
Centisome position: 31.83
GC content: 47.17
Gene sequence:
>1698_bases GTGGTCGAGGTTGTTGAAGTCCATCTTGATCTCTGTGACAAGGCAAGTCAGACCTTTAAGGTCAGCCTGAAATGGAAGCC AAGAACACATCGTCAGAGCTGGTCTTTGCCGATATGGACCCCAGGCTCATACACCATTAGAGACCATGTTCAGTATCTCC ACAGTCTGAGCCTTTCTCAAGCCTCAAATGATTGTCAAGTGCAACGGATCGGCCCAAGTGCTTGGAAGGCTGATCTCGAC ACTCTTGATCTTGTCACCCTTGGCTATGTCATTGAGGCTCGACAGCTCACAGTGCGCACCTGCTACTTAGATCCGGAGTT TGCATCCCTTTGTCTTGCGGCAGCTGTGATGGAAATCGATGGTCAACGTTGGACTCCTCATTGCCTCACCTTGGCCCTGC CAGCGGGTTGGAATGCCTACGTTCCACTCGCTGGAGAGGAACCACTCTGGGCTAAGGATTTTGATCATCTTGTTGATGCT CCTATTCATGCTGGCTGTTTCGTTTCTCAGCCCTTTGTTGTCAAAAAAAATTCTCATCAACTTCTCTGCATAGGTGATCC TCCTATGGGATGGCCAGCAAACCTTGTGAATGATGTCAGCGCTATTTGTAAAGCTACCTGTTGTCTAATGGATGAACCTC CACCAGCAGGAGATCTCTACCAATTAGTGATTCATATGTTAGAAGCGGGTTATGGCGGTCTTGAACATGATTATGGTGCA GTTTTGCATTATTCCTGGCGGGCATTAACTGAGCCTGATGGCTATCGGAAGCTCCTACAATTGATAGGGCATGAGTATTT GCATCAATGGAATGTGAGACGTCTTCGACCCAGGGAATATCGACCTTACGATTATTCTCAAGCTGTGATAAGTGATGGAC TCTGGTTTGCCGAAGGAATCACTAGCTACCTTGACCTCACCCTGCCATTCCTTGCTGGGCTGAGCGATCGCACAACATTA CTAAAAGATTTATCTCTAGAGTTTTCACCTCTATTAATCAACCCAGGTCGTCAAGTACAGAGCCTGGCAGACAGTTCACG TGAAGCCTGGGTGAAATTGTATAAAGCAACACCGGCCAGTGCCGATTCACAGGTCAGTTACTACAGGCTTGGTGCTGCGA TGGCCTTTTGCCTGGATGTTCGCCTACGCAAGCAAAACTCGTCTTTAACGCAAGTACTCCGTGACCTTTGGCGGAAGTTT GGGGGTAGTCATCGAGGTTATTCCAGGTTAGACATCAAAGCTGCCATCGCCAAGTTCGATCCCAATACTGCTAATGAGGT TGATGCATGGCTTGATCAACCTGACTCTCTCCCGTTGACTTCGATAGTTGCAGATCTTGGACTGAGGTTTGAAGAGAGAT ATTCAAACAAAAGAGAAACAGGTCTTACTTTAGTTGAACGAGAGGGGCTTGTTTACGTGTCAAGAGTTGCTCTATCTAGT CCAGCCCATCATGCAGGTCTTGTAGTTGGAGATGAATTGCTTGCCGTCGGCGGATTTCGATTGCGAAAGGTCGATGATTT ATACAAACTTATCTCCAATGAAGAGCCTGTATCCATCACTTTTTCAAGGCGAGGACGACTTAGTGAAACAGCACTTTCGA GTGGTTTGCCCCAAGTCGATCACTGGGAGATTATTGTTGATTCTGAGGCACCATCTGAGTTAAGCAATCTACGGGATCGA TGGCTTCAGATTATTTAA
Upstream 100 bases:
>100_bases CTCAAAGCCATGATCAAGAACATCTTCCGTCAAGATACCCTTTTCCAGGGCCATTACAGTTGTTGCATAACGTCTGAGCT TGTTTTTGAGGTTGAGTGAG
Downstream 100 bases:
>100_bases CCACTCTGATTATGTCTATTAGGAGTAAAACTAAACGATTCCTAATCATAATCATATTTTCAATAAGTGGTTTGATAATA TTCACCAGGTATACAAAGAA
Product: PDZ domain-containing protein
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQASNDCQVQRIGPSAWKADLD TLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEIDGQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDA PIHAGCFVSQPFVVKKNSHQLLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGITSYLDLTLPFLAGLSDRTTL LKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPASADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKF GGSHRGYSRLDIKAAIAKFDPNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVDHWEIIVDSEAPSELSNLRDR WLQII
Sequences:
>Translated_565_residues MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQASNDCQVQRIGPSAWKADLD TLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEIDGQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDA PIHAGCFVSQPFVVKKNSHQLLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGITSYLDLTLPFLAGLSDRTTL LKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPASADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKF GGSHRGYSRLDIKAAIAKFDPNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVDHWEIIVDSEAPSELSNLRDR WLQII >Mature_565_residues MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQASNDCQVQRIGPSAWKADLD TLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEIDGQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDA PIHAGCFVSQPFVVKKNSHQLLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGITSYLDLTLPFLAGLSDRTTL LKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPASADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKF GGSHRGYSRLDIKAAIAKFDPNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVDHWEIIVDSEAPSELSNLRDR WLQII
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63499; Mature: 63499
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQ CCEEEEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC ASNDCQVQRIGPSAWKADLDTLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEID CCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCEEEEEEEEECHHHHHHHHHHHHHHHC GQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDAPIHAGCFVSQPFVVKKNSHQ CCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCCEEEECCCCE LLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCE VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGI EEEEEEHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHCCCHHHHHH TSYLDLTLPFLAGLSDRTTLLKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPAS HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHCHHHHHHHHEECCCCC ADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKFGGSHRGYSRLDIKAAIAKFD CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCC PNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS CCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCHHCCCEEEECCCEEEEEEHHHCC PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVD CCCCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCC HWEIIVDSEAPSELSNLRDRWLQII CEEEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQ CCEEEEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC ASNDCQVQRIGPSAWKADLDTLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEID CCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCEEEEEEEEECHHHHHHHHHHHHHHHC GQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDAPIHAGCFVSQPFVVKKNSHQ CCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCCEEEECCCCE LLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCE VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGI EEEEEEHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHCCCHHHHHH TSYLDLTLPFLAGLSDRTTLLKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPAS HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHCHHHHHHHHEECCCCC ADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKFGGSHRGYSRLDIKAAIAKFD CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCC PNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS CCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCHHCCCEEEECCCEEEEEEHHHCC PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVD CCCCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCC HWEIIVDSEAPSELSNLRDRWLQII CEEEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA