Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

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The map label for this gene is 33862983

Identifier: 33862983

GI number: 33862983

Start: 767416

End: 769113

Strand: Direct

Name: 33862983

Synonym: PMT0711

Alternate gene names: NA

Gene position: 767416-769113 (Clockwise)

Preceding gene: 33862981

Following gene: 33862984

Centisome position: 31.83

GC content: 47.17

Gene sequence:

>1698_bases
GTGGTCGAGGTTGTTGAAGTCCATCTTGATCTCTGTGACAAGGCAAGTCAGACCTTTAAGGTCAGCCTGAAATGGAAGCC
AAGAACACATCGTCAGAGCTGGTCTTTGCCGATATGGACCCCAGGCTCATACACCATTAGAGACCATGTTCAGTATCTCC
ACAGTCTGAGCCTTTCTCAAGCCTCAAATGATTGTCAAGTGCAACGGATCGGCCCAAGTGCTTGGAAGGCTGATCTCGAC
ACTCTTGATCTTGTCACCCTTGGCTATGTCATTGAGGCTCGACAGCTCACAGTGCGCACCTGCTACTTAGATCCGGAGTT
TGCATCCCTTTGTCTTGCGGCAGCTGTGATGGAAATCGATGGTCAACGTTGGACTCCTCATTGCCTCACCTTGGCCCTGC
CAGCGGGTTGGAATGCCTACGTTCCACTCGCTGGAGAGGAACCACTCTGGGCTAAGGATTTTGATCATCTTGTTGATGCT
CCTATTCATGCTGGCTGTTTCGTTTCTCAGCCCTTTGTTGTCAAAAAAAATTCTCATCAACTTCTCTGCATAGGTGATCC
TCCTATGGGATGGCCAGCAAACCTTGTGAATGATGTCAGCGCTATTTGTAAAGCTACCTGTTGTCTAATGGATGAACCTC
CACCAGCAGGAGATCTCTACCAATTAGTGATTCATATGTTAGAAGCGGGTTATGGCGGTCTTGAACATGATTATGGTGCA
GTTTTGCATTATTCCTGGCGGGCATTAACTGAGCCTGATGGCTATCGGAAGCTCCTACAATTGATAGGGCATGAGTATTT
GCATCAATGGAATGTGAGACGTCTTCGACCCAGGGAATATCGACCTTACGATTATTCTCAAGCTGTGATAAGTGATGGAC
TCTGGTTTGCCGAAGGAATCACTAGCTACCTTGACCTCACCCTGCCATTCCTTGCTGGGCTGAGCGATCGCACAACATTA
CTAAAAGATTTATCTCTAGAGTTTTCACCTCTATTAATCAACCCAGGTCGTCAAGTACAGAGCCTGGCAGACAGTTCACG
TGAAGCCTGGGTGAAATTGTATAAAGCAACACCGGCCAGTGCCGATTCACAGGTCAGTTACTACAGGCTTGGTGCTGCGA
TGGCCTTTTGCCTGGATGTTCGCCTACGCAAGCAAAACTCGTCTTTAACGCAAGTACTCCGTGACCTTTGGCGGAAGTTT
GGGGGTAGTCATCGAGGTTATTCCAGGTTAGACATCAAAGCTGCCATCGCCAAGTTCGATCCCAATACTGCTAATGAGGT
TGATGCATGGCTTGATCAACCTGACTCTCTCCCGTTGACTTCGATAGTTGCAGATCTTGGACTGAGGTTTGAAGAGAGAT
ATTCAAACAAAAGAGAAACAGGTCTTACTTTAGTTGAACGAGAGGGGCTTGTTTACGTGTCAAGAGTTGCTCTATCTAGT
CCAGCCCATCATGCAGGTCTTGTAGTTGGAGATGAATTGCTTGCCGTCGGCGGATTTCGATTGCGAAAGGTCGATGATTT
ATACAAACTTATCTCCAATGAAGAGCCTGTATCCATCACTTTTTCAAGGCGAGGACGACTTAGTGAAACAGCACTTTCGA
GTGGTTTGCCCCAAGTCGATCACTGGGAGATTATTGTTGATTCTGAGGCACCATCTGAGTTAAGCAATCTACGGGATCGA
TGGCTTCAGATTATTTAA

Upstream 100 bases:

>100_bases
CTCAAAGCCATGATCAAGAACATCTTCCGTCAAGATACCCTTTTCCAGGGCCATTACAGTTGTTGCATAACGTCTGAGCT
TGTTTTTGAGGTTGAGTGAG

Downstream 100 bases:

>100_bases
CCACTCTGATTATGTCTATTAGGAGTAAAACTAAACGATTCCTAATCATAATCATATTTTCAATAAGTGGTTTGATAATA
TTCACCAGGTATACAAAGAA

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQASNDCQVQRIGPSAWKADLD
TLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEIDGQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDA
PIHAGCFVSQPFVVKKNSHQLLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA
VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGITSYLDLTLPFLAGLSDRTTL
LKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPASADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKF
GGSHRGYSRLDIKAAIAKFDPNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS
PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVDHWEIIVDSEAPSELSNLRDR
WLQII

Sequences:

>Translated_565_residues
MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQASNDCQVQRIGPSAWKADLD
TLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEIDGQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDA
PIHAGCFVSQPFVVKKNSHQLLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA
VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGITSYLDLTLPFLAGLSDRTTL
LKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPASADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKF
GGSHRGYSRLDIKAAIAKFDPNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS
PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVDHWEIIVDSEAPSELSNLRDR
WLQII
>Mature_565_residues
MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQASNDCQVQRIGPSAWKADLD
TLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEIDGQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDA
PIHAGCFVSQPFVVKKNSHQLLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA
VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGITSYLDLTLPFLAGLSDRTTL
LKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPASADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKF
GGSHRGYSRLDIKAAIAKFDPNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS
PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVDHWEIIVDSEAPSELSNLRDR
WLQII

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63499; Mature: 63499

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50106 PDZ ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQ
CCEEEEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
ASNDCQVQRIGPSAWKADLDTLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEID
CCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCEEEEEEEEECHHHHHHHHHHHHHHHC
GQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDAPIHAGCFVSQPFVVKKNSHQ
CCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCCEEEECCCCE
LLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA
EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCE
VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGI
EEEEEEHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHCCCHHHHHH
TSYLDLTLPFLAGLSDRTTLLKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPAS
HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHCHHHHHHHHEECCCCC
ADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKFGGSHRGYSRLDIKAAIAKFD
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCC
PNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS
CCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCHHCCCEEEECCCEEEEEEHHHCC
PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVD
CCCCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCC
HWEIIVDSEAPSELSNLRDRWLQII
CEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVEVVEVHLDLCDKASQTFKVSLKWKPRTHRQSWSLPIWTPGSYTIRDHVQYLHSLSLSQ
CCEEEEEHHHHHCCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
ASNDCQVQRIGPSAWKADLDTLDLVTLGYVIEARQLTVRTCYLDPEFASLCLAAAVMEID
CCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCEEEEEEEEECHHHHHHHHHHHHHHHC
GQRWTPHCLTLALPAGWNAYVPLAGEEPLWAKDFDHLVDAPIHAGCFVSQPFVVKKNSHQ
CCCCCCCEEEEEECCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCEEECCCEEEECCCCE
LLCIGDPPMGWPANLVNDVSAICKATCCLMDEPPPAGDLYQLVIHMLEAGYGGLEHDYGA
EEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCE
VLHYSWRALTEPDGYRKLLQLIGHEYLHQWNVRRLRPREYRPYDYSQAVISDGLWFAEGI
EEEEEEHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHCCCHHHHHH
TSYLDLTLPFLAGLSDRTTLLKDLSLEFSPLLINPGRQVQSLADSSREAWVKLYKATPAS
HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHCHHHHHHHHEECCCCC
ADSQVSYYRLGAAMAFCLDVRLRKQNSSLTQVLRDLWRKFGGSHRGYSRLDIKAAIAKFD
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHCC
PNTANEVDAWLDQPDSLPLTSIVADLGLRFEERYSNKRETGLTLVEREGLVYVSRVALSS
CCCCHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHCCCHHCCCEEEECCCEEEEEEHHHCC
PAHHAGLVVGDELLAVGGFRLRKVDDLYKLISNEEPVSITFSRRGRLSETALSSGLPQVD
CCCCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCC
HWEIIVDSEAPSELSNLRDRWLQII
CEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA