| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862935
Identifier: 33862935
GI number: 33862935
Start: 719489
End: 720565
Strand: Direct
Name: 33862935
Synonym: PMT0663
Alternate gene names: NA
Gene position: 719489-720565 (Clockwise)
Preceding gene: 109150049
Following gene: 33862936
Centisome position: 29.84
GC content: 51.62
Gene sequence:
>1077_bases GTGCTGATTTACCTCTGCTTGAGCAGTCATGGCTATGGCCATGCAGCACGCCAGGCAGCTGTTCTTATAGAACTGCATCG TCTTCAGCCGCAATGGCGATTCGTAGTGAGTACGGATGTGGACTTCCAATTCCTCAACCTTGCGCTGCAAGGTGTCCCTT TCGAACACCGCAAACTGCGCTGGGATGTGGGCATGGTTCAGGCGAATGCCTTAGCCATTGACCAAATGGCCACTCTCAAG GCTTTGCAGGAACTTGAACAACACATTCCTGCCCAAATTGCGGCTGAGGTCTCTTGGATTCAGTCTCAACAGATGTCGGT ACTTGTACTTGCTGACATTCCACCTGCTGCTGCTGAGTTGGCTGATCAGCTTGGTGTTCCTTTGGTATGGATGGGCAACT TTGGTTGGGATGAGATCTACGCCCCTCTAGGAGATTCTTTTCTTACCCACGCTGAAGCTGCGTCAGCTGAATACTCACGT GGGCAGAAGTTGTTACGTTGCCCATTCTCACTTGCAATGGACTGGGGGCTACCTGAACAGAGCCTGGGCATAACTGCGTC CTCACCTCGTTCACTACCGCTAGGACTCCAGCAGAGACTTGAATCTTTTCAAGGTCCAATCGTCATGGTGGGATTTGGCG GGCTGGGTTTGGCACTCGACTCAGAGTTATTCCAACGCTGGCCTGATCACCTCTTTTTGATGCCCAAACCACGATCTGTT GACACTTTTCTGAGAAGGCAATCACCTGACAATGTTTTGTATCTACCTAGGTCAATTCGAGTTGTCGATGCTCTTCCTTA CTGCTCTAGGCACCTTGGGAAGCCTGGTTACAGCAGTTTCTGTGAAGCCATCAGCTTGGGTGTCGGCCTTCATGTGGTTC TTCGAGAAGGCTTTGCAGAATCGGTAGCACTGATCAACGGCTTACAAAGCCATGCAGCCCATCGGCTGCTTGAGCGCGAG GCCCTCGAGCTTGGAGAATGGGATTTAGATCAACCCCTGATACCAGCTTCTCAGCAACCGCTGGCTGTCGATGGATCCGT GGAGGCAGCAAGTGCTGTAGTTGAACTGGTCTCTTAA
Upstream 100 bases:
>100_bases ATGGAAAGCTCAGTCAGGTGAGCCACCGTTGGTTTCTTCCAGATTCATCCTTGGCCTATGAACAGATTCTTTTTGAAAGA GCAACACCATTGGTGACACA
Downstream 100 bases:
>100_bases TCAGAATTACTAATCAAAAATCTTAGATCGTTCAATATGCACAACGCTGATTCTTCAACTTGGATTTCAGCGATCTTTGG GCCCAACTCAACCATTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MLIYLCLSSHGYGHAARQAAVLIELHRLQPQWRFVVSTDVDFQFLNLALQGVPFEHRKLRWDVGMVQANALAIDQMATLK ALQELEQHIPAQIAAEVSWIQSQQMSVLVLADIPPAAAELADQLGVPLVWMGNFGWDEIYAPLGDSFLTHAEAASAEYSR GQKLLRCPFSLAMDWGLPEQSLGITASSPRSLPLGLQQRLESFQGPIVMVGFGGLGLALDSELFQRWPDHLFLMPKPRSV DTFLRRQSPDNVLYLPRSIRVVDALPYCSRHLGKPGYSSFCEAISLGVGLHVVLREGFAESVALINGLQSHAAHRLLERE ALELGEWDLDQPLIPASQQPLAVDGSVEAASAVVELVS
Sequences:
>Translated_358_residues MLIYLCLSSHGYGHAARQAAVLIELHRLQPQWRFVVSTDVDFQFLNLALQGVPFEHRKLRWDVGMVQANALAIDQMATLK ALQELEQHIPAQIAAEVSWIQSQQMSVLVLADIPPAAAELADQLGVPLVWMGNFGWDEIYAPLGDSFLTHAEAASAEYSR GQKLLRCPFSLAMDWGLPEQSLGITASSPRSLPLGLQQRLESFQGPIVMVGFGGLGLALDSELFQRWPDHLFLMPKPRSV DTFLRRQSPDNVLYLPRSIRVVDALPYCSRHLGKPGYSSFCEAISLGVGLHVVLREGFAESVALINGLQSHAAHRLLERE ALELGEWDLDQPLIPASQQPLAVDGSVEAASAVVELVS >Mature_358_residues MLIYLCLSSHGYGHAARQAAVLIELHRLQPQWRFVVSTDVDFQFLNLALQGVPFEHRKLRWDVGMVQANALAIDQMATLK ALQELEQHIPAQIAAEVSWIQSQQMSVLVLADIPPAAAELADQLGVPLVWMGNFGWDEIYAPLGDSFLTHAEAASAEYSR GQKLLRCPFSLAMDWGLPEQSLGITASSPRSLPLGLQQRLESFQGPIVMVGFGGLGLALDSELFQRWPDHLFLMPKPRSV DTFLRRQSPDNVLYLPRSIRVVDALPYCSRHLGKPGYSSFCEAISLGVGLHVVLREGFAESVALINGLQSHAAHRLLERE ALELGEWDLDQPLIPASQQPLAVDGSVEAASAVVELVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39398; Mature: 39398
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIYLCLSSHGYGHAARQAAVLIELHRLQPQWRFVVSTDVDFQFLNLALQGVPFEHRKLR CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEHHHHHCCCCHHHEEE WDVGMVQANALAIDQMATLKALQELEQHIPAQIAAEVSWIQSQQMSVLVLADIPPAAAEL EECCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHH ADQLGVPLVWMGNFGWDEIYAPLGDSFLTHAEAASAEYSRGQKLLRCPFSLAMDWGLPEQ HHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCHH SLGITASSPRSLPLGLQQRLESFQGPIVMVGFGGLGLALDSELFQRWPDHLFLMPKPRSV HCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCH DTFLRRQSPDNVLYLPRSIRVVDALPYCSRHLGKPGYSSFCEAISLGVGLHVVLREGFAE HHHHHHCCCCCEEECCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH SVALINGLQSHAAHRLLEREALELGEWDLDQPLIPASQQPLAVDGSVEAASAVVELVS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCC >Mature Secondary Structure MLIYLCLSSHGYGHAARQAAVLIELHRLQPQWRFVVSTDVDFQFLNLALQGVPFEHRKLR CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHEEHHHHHCCCCHHHEEE WDVGMVQANALAIDQMATLKALQELEQHIPAQIAAEVSWIQSQQMSVLVLADIPPAAAEL EECCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHH ADQLGVPLVWMGNFGWDEIYAPLGDSFLTHAEAASAEYSRGQKLLRCPFSLAMDWGLPEQ HHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCCCCHH SLGITASSPRSLPLGLQQRLESFQGPIVMVGFGGLGLALDSELFQRWPDHLFLMPKPRSV HCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCH DTFLRRQSPDNVLYLPRSIRVVDALPYCSRHLGKPGYSSFCEAISLGVGLHVVLREGFAE HHHHHHCCCCCEEECCCCEEEHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHH SVALINGLQSHAAHRLLEREALELGEWDLDQPLIPASQQPLAVDGSVEAASAVVELVS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA