| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 109150049
Identifier: 109150049
GI number: 109150049
Start: 718698
End: 719495
Strand: Direct
Name: 109150049
Synonym: PMT0662
Alternate gene names: NA
Gene position: 718698-719495 (Clockwise)
Preceding gene: 33862933
Following gene: 33862935
Centisome position: 29.81
GC content: 53.13
Gene sequence:
>798_bases CTGACTGAACTTCAGCCAGATGCTGTGTTGTTTGTAGGTGATCTCAGCGAAGGTGATCTCAAGTTGGTCAAAGCAATACA ACAGCTTCCTCTGCCGACAGCTGTCATTCTTGGTAATCATGACCACGGACGTGATCACAGCGGCGCAGTCCTCAGGCGTC AATTGACCTTATTGGGCGACCGTCATTGCGGTTGGAGTTTGCGACAATGGCAGTTTCCACCGATTGCTGTCGTTGGCGCC CGCCCTTGTAGTGCTGGTGGTGGCTTTCACCTCGCCAAAGCCGTTCAGGCGGTTTTTGGCCCGATGTCGGTCAGTGAATC TGCTGACCGGATTGAGGCCGCTGCAAAGCAGGCACCATCCCAATGGCCCTTAGTGATATTGGCTCATTCCGGTCCGACGG GCCTCGGCTCTGATGCTCAGAGCCCTTGTGGTCGCGATTGGAAAGTTCCCGCTCTCGATTGGGGCGATCAGGATCTTGCG ATGGCCCTTGATCGGATCCGTAAGCATCGTTTGCCAGATCTGGTTGTCTTTGGCCACATGCATCATGAACTCAAACGCGG AACAGGTTTGCGGCAAACATGTGTTCAGGATCGCTTTGGCACTGTCTTTCTCAATGCTGCTTGTGTACCGCGGCGTGGAA GTGATTCCTCTGGTCGTCAGTTGTGTCACTTTTCCTGGGTCGAGTTCCTTGATGGAAAGCTCAGTCAGGTGAGCCACCGT TGGTTTCTTCCAGATTCATCCTTGGCCTATGAACAGATTCTTTTTGAAAGAGCAACACCATTGGTGACACAGTGCTGA
Upstream 100 bases:
>100_bases GGGCAGTATGGCCATAGCCTAGACATTTGCCACGTCACACCAGAGCCTCGCCATTGTTGGAGACCTCCATGGTGTATGGA CACCTGATGATCAGAACTTA
Downstream 100 bases:
>100_bases TTTACCTCTGCTTGAGCAGTCATGGCTATGGCCATGCAGCACGCCAGGCAGCTGTTCTTATAGAACTGCATCGTCTTCAG CCGCAATGGCGATTCGTAGT
Product: transcripton factor
Products: NA
Alternate protein names: Metallophosphoesterase; Phosphoesterase; Ser/Thr Protein Phosphatase Family Protein; Transcripton Factor DevT-Like; Transcripton Factor For Heterocyst Differentiation
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTELQPDAVLFVGDLSEGDLKLVKAIQQLPLPTAVILGNHDHGRDHSGAVLRRQLTLLGDRHCGWSLRQWQFPPIAVVGA RPCSAGGGFHLAKAVQAVFGPMSVSESADRIEAAAKQAPSQWPLVILAHSGPTGLGSDAQSPCGRDWKVPALDWGDQDLA MALDRIRKHRLPDLVVFGHMHHELKRGTGLRQTCVQDRFGTVFLNAACVPRRGSDSSGRQLCHFSWVEFLDGKLSQVSHR WFLPDSSLAYEQILFERATPLVTQC
Sequences:
>Translated_265_residues MTELQPDAVLFVGDLSEGDLKLVKAIQQLPLPTAVILGNHDHGRDHSGAVLRRQLTLLGDRHCGWSLRQWQFPPIAVVGA RPCSAGGGFHLAKAVQAVFGPMSVSESADRIEAAAKQAPSQWPLVILAHSGPTGLGSDAQSPCGRDWKVPALDWGDQDLA MALDRIRKHRLPDLVVFGHMHHELKRGTGLRQTCVQDRFGTVFLNAACVPRRGSDSSGRQLCHFSWVEFLDGKLSQVSHR WFLPDSSLAYEQILFERATPLVTQC >Mature_264_residues TELQPDAVLFVGDLSEGDLKLVKAIQQLPLPTAVILGNHDHGRDHSGAVLRRQLTLLGDRHCGWSLRQWQFPPIAVVGAR PCSAGGGFHLAKAVQAVFGPMSVSESADRIEAAAKQAPSQWPLVILAHSGPTGLGSDAQSPCGRDWKVPALDWGDQDLAM ALDRIRKHRLPDLVVFGHMHHELKRGTGLRQTCVQDRFGTVFLNAACVPRRGSDSSGRQLCHFSWVEFLDGKLSQVSHRW FLPDSSLAYEQILFERATPLVTQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29090; Mature: 28958
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELQPDAVLFVGDLSEGDLKLVKAIQQLPLPTAVILGNHDHGRDHSGAVLRRQLTLLGD CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC RHCGWSLRQWQFPPIAVVGARPCSAGGGFHLAKAVQAVFGPMSVSESADRIEAAAKQAPS CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC QWPLVILAHSGPTGLGSDAQSPCGRDWKVPALDWGDQDLAMALDRIRKHRLPDLVVFGHM CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHH HHELKRGTGLRQTCVQDRFGTVFLNAACVPRRGSDSSGRQLCHFSWVEFLDGKLSQVSHR HHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCE WFLPDSSLAYEQILFERATPLVTQC EECCCCHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure TELQPDAVLFVGDLSEGDLKLVKAIQQLPLPTAVILGNHDHGRDHSGAVLRRQLTLLGD CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC RHCGWSLRQWQFPPIAVVGARPCSAGGGFHLAKAVQAVFGPMSVSESADRIEAAAKQAPS CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC QWPLVILAHSGPTGLGSDAQSPCGRDWKVPALDWGDQDLAMALDRIRKHRLPDLVVFGHM CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHH HHELKRGTGLRQTCVQDRFGTVFLNAACVPRRGSDSSGRQLCHFSWVEFLDGKLSQVSHR HHHHHHCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCE WFLPDSSLAYEQILFERATPLVTQC EECCCCHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA