| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862681
Identifier: 33862681
GI number: 33862681
Start: 458733
End: 459083
Strand: Direct
Name: 33862681
Synonym: PMT0408
Alternate gene names: NA
Gene position: 458733-459083 (Clockwise)
Preceding gene: 33862680
Following gene: 33862694
Centisome position: 19.03
GC content: 48.43
Gene sequence:
>351_bases ATGTTCAACCCGGAGTTCCTGACCACCGATAACAGCGATTGCCAGGACGGTAATGGGCTAATTCAGTACCTTCAGGATCA ATCCCCTGATGTATTGCAGCGAGTTGCCAAGTCCGCCAGCAATGATATTCAGGACATTATTCGCCACAATGTTCAGGGCC TGCTGGGCATGATCCCAGGTGAGCAATTTGAAGTGAAGGTCACAGCCAGTCGAGATAATCTCGCCAGTTTGCTCGCATCA GCAATGATGACTGGATATTTCTTGCGCCAAATGGAGCAACGCAAGGAATTGGAAGAGTCGTTGTTTTCAGATGAAGCGAT GGCAGTCGACACAGATGATCTCAATCTTTGA
Upstream 100 bases:
>100_bases ACTCAATCGGTTCGGTCCAATACGGTTCCCCTCCCAAGGCAAGAGTGGATCAAACGACCTAGCTGCGATAGGGTCAACAT CGTGACGAAAAGCACACCGG
Downstream 100 bases:
>100_bases AGGCTGCCTGAGGATCTTTCGGTACCACACCAAGGTTGAGCAGGCGTTGATCAACGCTGCCTAGAAAGCTCCAGCTGGCT TGATTGATAGCCCATGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MFNPEFLTTDNSDCQDGNGLIQYLQDQSPDVLQRVAKSASNDIQDIIRHNVQGLLGMIPGEQFEVKVTASRDNLASLLAS AMMTGYFLRQMEQRKELEESLFSDEAMAVDTDDLNL
Sequences:
>Translated_116_residues MFNPEFLTTDNSDCQDGNGLIQYLQDQSPDVLQRVAKSASNDIQDIIRHNVQGLLGMIPGEQFEVKVTASRDNLASLLAS AMMTGYFLRQMEQRKELEESLFSDEAMAVDTDDLNL >Mature_116_residues MFNPEFLTTDNSDCQDGNGLIQYLQDQSPDVLQRVAKSASNDIQDIIRHNVQGLLGMIPGEQFEVKVTASRDNLASLLAS AMMTGYFLRQMEQRKELEESLFSDEAMAVDTDDLNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13004; Mature: 13004
Theoretical pI: Translated: 3.92; Mature: 3.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNPEFLTTDNSDCQDGNGLIQYLQDQSPDVLQRVAKSASNDIQDIIRHNVQGLLGMIPG CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC EQFEVKVTASRDNLASLLASAMMTGYFLRQMEQRKELEESLFSDEAMAVDTDDLNL CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure MFNPEFLTTDNSDCQDGNGLIQYLQDQSPDVLQRVAKSASNDIQDIIRHNVQGLLGMIPG CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC EQFEVKVTASRDNLASLLASAMMTGYFLRQMEQRKELEESLFSDEAMAVDTDDLNL CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA