Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
---|---|
Accession | NC_005071 |
Length | 2,410,873 |
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The map label for this gene is btuE [C]
Identifier: 33862398
GI number: 33862398
Start: 141551
End: 142036
Strand: Reverse
Name: btuE [C]
Synonym: PMT0125
Alternate gene names: 33862398
Gene position: 142036-141551 (Counterclockwise)
Preceding gene: 33862401
Following gene: 33862393
Centisome position: 5.89
GC content: 55.35
Gene sequence:
>486_bases ATGTCCATGGCCATCAACATCAGCCAGATTGTGGTTCGCACTCCAGAGGGTGCTGAGAAGTCCCTCAGCGAATACAGCGG CACGGTGCTGTTAATCGTGAATGTGGCCAGCCGATGTGGATTTACCAAGCAATACAAAGGCCTGCAGGCGCTGCAAAACA CATACGGCCCTCAGGGACTAAAGGTGCTGGGCTTTCCTTGCAACGACTTTGGCGCCCAGGAGCCCGGCACCCTCGAGGAG ATCAAGAGCTTCTGTTCCACCACCTACGGCGCCAGCTTCGAATTGTTTGACAAGGTGCACGCCATGGGCAAAACCACCGA GCCCTACACCACCCTCAATCAAACTGAACCAGCAGGAGATGTGGCCTGGAACTTCGAAAAGTTTCTTGTGGGTAAGGACG GCACCGTGCTCAAACGTTTCAAGAGCGGCGTGGAACCTGAAAGCACTGAGCTCAAGGCAGCTATCGACCAAGCCCTGATG GCCTGA
Upstream 100 bases:
>100_bases CCGGACTGGTTGCCCCCGTTGCCTCGTTCATCGGCCAACCGTCAAGGCGAGCACACTGTATGGCGAATGGTCCTCGCTAG GGTCTTGAAGACAAAACCAA
Downstream 100 bases:
>100_bases ACTGCCAACCAATCAAAAAACCAAGGGCTGCAACACCAAGACCTAAGCCCATGGTTAAACCAATCAATCCCAGCGCTGAC AACCAAGCCCCCTGAGAGAT
Product: glutathione peroxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSMAINISQIVVRTPEGAEKSLSEYSGTVLLIVNVASRCGFTKQYKGLQALQNTYGPQGLKVLGFPCNDFGAQEPGTLEE IKSFCSTTYGASFELFDKVHAMGKTTEPYTTLNQTEPAGDVAWNFEKFLVGKDGTVLKRFKSGVEPESTELKAAIDQALM A
Sequences:
>Translated_161_residues MSMAINISQIVVRTPEGAEKSLSEYSGTVLLIVNVASRCGFTKQYKGLQALQNTYGPQGLKVLGFPCNDFGAQEPGTLEE IKSFCSTTYGASFELFDKVHAMGKTTEPYTTLNQTEPAGDVAWNFEKFLVGKDGTVLKRFKSGVEPESTELKAAIDQALM A >Mature_160_residues SMAINISQIVVRTPEGAEKSLSEYSGTVLLIVNVASRCGFTKQYKGLQALQNTYGPQGLKVLGFPCNDFGAQEPGTLEEI KSFCSTTYGASFELFDKVHAMGKTTEPYTTLNQTEPAGDVAWNFEKFLVGKDGTVLKRFKSGVEPESTELKAAIDQALMA
Specific function: Not Essential For B12 Transport; However, It Is An Auxiliary Component Of The Transport System. [C]
COG id: COG0386
COG function: function code O; Glutathione peroxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutathione peroxidase family [H]
Homologues:
Organism=Homo sapiens, GI15618997, Length=119, Percent_Identity=48.7394957983193, Blast_Score=113, Evalue=6e-26, Organism=Homo sapiens, GI192455698, Length=152, Percent_Identity=36.1842105263158, Blast_Score=104, Evalue=4e-23, Organism=Homo sapiens, GI75709200, Length=154, Percent_Identity=36.3636363636364, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI90903240, Length=150, Percent_Identity=36.6666666666667, Blast_Score=101, Evalue=2e-22, Organism=Homo sapiens, GI4557629, Length=163, Percent_Identity=37.4233128834356, Blast_Score=94, Evalue=5e-20, Organism=Homo sapiens, GI41406084, Length=153, Percent_Identity=41.1764705882353, Blast_Score=90, Evalue=7e-19, Organism=Homo sapiens, GI6006001, Length=143, Percent_Identity=39.1608391608392, Blast_Score=88, Evalue=4e-18, Organism=Homo sapiens, GI90903238, Length=132, Percent_Identity=35.6060606060606, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI33186887, Length=138, Percent_Identity=38.4057971014493, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI32967607, Length=175, Percent_Identity=32, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788003, Length=181, Percent_Identity=39.7790055248619, Blast_Score=137, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17535473, Length=160, Percent_Identity=40.625, Blast_Score=119, Evalue=7e-28, Organism=Caenorhabditis elegans, GI17506887, Length=155, Percent_Identity=40, Blast_Score=115, Evalue=1e-26, Organism=Caenorhabditis elegans, GI193210707, Length=153, Percent_Identity=39.8692810457516, Blast_Score=102, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71993584, Length=158, Percent_Identity=33.5443037974684, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI193209493, Length=179, Percent_Identity=29.608938547486, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17550320, Length=174, Percent_Identity=28.1609195402299, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193210709, Length=71, Percent_Identity=49.2957746478873, Blast_Score=69, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71993573, Length=95, Percent_Identity=34.7368421052632, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322228, Length=143, Percent_Identity=43.3566433566434, Blast_Score=124, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6319721, Length=153, Percent_Identity=39.2156862745098, Blast_Score=123, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6322826, Length=138, Percent_Identity=39.1304347826087, Blast_Score=104, Evalue=6e-24, Organism=Drosophila melanogaster, GI85726443, Length=148, Percent_Identity=38.5135135135135, Blast_Score=102, Evalue=7e-23, Organism=Drosophila melanogaster, GI24656772, Length=149, Percent_Identity=37.5838926174497, Blast_Score=97, Evalue=5e-21, Organism=Drosophila melanogaster, GI24656777, Length=149, Percent_Identity=37.5838926174497, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI24656767, Length=149, Percent_Identity=37.5838926174497, Blast_Score=97, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000889 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00255 GSHPx [H]
EC number: =1.11.1.9 [H]
Molecular weight: Translated: 17473; Mature: 17342
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMAINISQIVVRTPEGAEKSLSEYSGTVLLIVNVASRCGFTKQYKGLQALQNTYGPQGL CCEEEEHHEEEEECCCCHHHHHHHHCCEEEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCC KVLGFPCNDFGAQEPGTLEEIKSFCSTTYGASFELFDKVHAMGKTTEPYTTLNQTEPAGD EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VAWNFEKFLVGKDGTVLKRFKSGVEPESTELKAAIDQALMA EEECHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SMAINISQIVVRTPEGAEKSLSEYSGTVLLIVNVASRCGFTKQYKGLQALQNTYGPQGL CEEEEHHEEEEECCCCHHHHHHHHCCEEEEEEEEHHHCCCHHHHHHHHHHHHCCCCCCC KVLGFPCNDFGAQEPGTLEEIKSFCSTTYGASFELFDKVHAMGKTTEPYTTLNQTEPAGD EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC VAWNFEKFLVGKDGTVLKRFKSGVEPESTELKAAIDQALMA EEECHHHEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]