Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33862383

Identifier: 33862383

GI number: 33862383

Start: 125340

End: 126119

Strand: Reverse

Name: 33862383

Synonym: PMT0110

Alternate gene names: NA

Gene position: 126119-125340 (Counterclockwise)

Preceding gene: 33862390

Following gene: 33862382

Centisome position: 5.23

GC content: 40.51

Gene sequence:

>780_bases
ATGCACGAAAGCTCAATGAAGCGGATGGAGTGGTTCATACAAACATACTTAGATGGAACAACAAATAGGAATATTCTTGA
TGTCGGAAGCTACAACGTGAACGGATGCTACAAAAGTCTGTTTCAACACGAAAGATTCAAATATGTGGGTCTGGACATGG
AGGCTGGACCAAATGTAGACATCGTGCCTGATTGCACATATCAGTGGAATGAAATAAAAGACGATCAATTCGATGTTGTC
ATTTCGGGACAAGCATTAGAACATATAGAATTCTTCTGGGTAACCATGGCTGAAATAGTAAGGGTTACAAAAAAGGGAGG
ATTCATATGTATAATTGCACCAAATGGCTTTGGAGAGCATCGGTATCCAGTAGATTGTTGGAGGTTTTTTACTGATGGCA
TGGTTGCTCTTGCCAGGTACAATCAACTCGAAGTTCATCACTCTCATACTAATTCCGCACCTACAATTAAGGAAGCTGAA
TGGTTTAGCGCCGACTGTGCCGATTCGATGCTTGTAGCAAGAAAGCCTTATAGTGGCGAAGCGAAGCCAGTGAATTTGGA
AAACTATAAGTGCAGACCAAGTGATCACACAGAGCTAAGCAACGGCATGGCTACATATGGCGAATACCTTGAGAGCAAAA
GAAAAGATCAAACATTGGATGAAACAAAAGACAGATCAAGTCAAAAAAGATCGAATCTCAAAAAAGGGAATATGAGTAAC
AGGCGAAGCAAACTAATAGAATTCATTACTGGGGCTATAAAAGCAGGAAAACGAAACTAA

Upstream 100 bases:

>100_bases
TAAAGAAAGAGGCTCAAGGAGCTTGGGAGAATACAGATGAAAGTAGGAACGAAGCACGTTCGGACTAATATTGGGCTAAT
TCAGAGCCCATGAACCAGCT

Downstream 100 bases:

>100_bases
TTAACAATCAACTCCCTCACCATATAAGACAATGAAAAAAAAGCTCTCTATCGTAAACTCGTACTATAGAAACAGGGAAT
TAATTAGACTATTTATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain Family Protein; Chromosome Segregation ATPases-Like

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVDIVPDCTYQWNEIKDDQFDVV
ISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEHRYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAE
WFSADCADSMLVARKPYSGEAKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN
RRSKLIEFITGAIKAGKRN

Sequences:

>Translated_259_residues
MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVDIVPDCTYQWNEIKDDQFDVV
ISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEHRYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAE
WFSADCADSMLVARKPYSGEAKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN
RRSKLIEFITGAIKAGKRN
>Mature_259_residues
MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVDIVPDCTYQWNEIKDDQFDVV
ISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEHRYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAE
WFSADCADSMLVARKPYSGEAKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN
RRSKLIEFITGAIKAGKRN

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29782; Mature: 29782

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVD
CCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCE
IVPDCTYQWNEIKDDQFDVVISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEH
ECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
RYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAEWFSADCADSMLVARKPYSGE
CCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHCCCCCHHCEEEEECCCCCC
AKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN
CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH
RRSKLIEFITGAIKAGKRN
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVD
CCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCE
IVPDCTYQWNEIKDDQFDVVISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEH
ECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
RYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAEWFSADCADSMLVARKPYSGE
CCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHCCCCCHHCEEEEECCCCCC
AKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN
CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH
RRSKLIEFITGAIKAGKRN
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA