Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
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Accession | NC_005071 |
Length | 2,410,873 |
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The map label for this gene is 33862383
Identifier: 33862383
GI number: 33862383
Start: 125340
End: 126119
Strand: Reverse
Name: 33862383
Synonym: PMT0110
Alternate gene names: NA
Gene position: 126119-125340 (Counterclockwise)
Preceding gene: 33862390
Following gene: 33862382
Centisome position: 5.23
GC content: 40.51
Gene sequence:
>780_bases ATGCACGAAAGCTCAATGAAGCGGATGGAGTGGTTCATACAAACATACTTAGATGGAACAACAAATAGGAATATTCTTGA TGTCGGAAGCTACAACGTGAACGGATGCTACAAAAGTCTGTTTCAACACGAAAGATTCAAATATGTGGGTCTGGACATGG AGGCTGGACCAAATGTAGACATCGTGCCTGATTGCACATATCAGTGGAATGAAATAAAAGACGATCAATTCGATGTTGTC ATTTCGGGACAAGCATTAGAACATATAGAATTCTTCTGGGTAACCATGGCTGAAATAGTAAGGGTTACAAAAAAGGGAGG ATTCATATGTATAATTGCACCAAATGGCTTTGGAGAGCATCGGTATCCAGTAGATTGTTGGAGGTTTTTTACTGATGGCA TGGTTGCTCTTGCCAGGTACAATCAACTCGAAGTTCATCACTCTCATACTAATTCCGCACCTACAATTAAGGAAGCTGAA TGGTTTAGCGCCGACTGTGCCGATTCGATGCTTGTAGCAAGAAAGCCTTATAGTGGCGAAGCGAAGCCAGTGAATTTGGA AAACTATAAGTGCAGACCAAGTGATCACACAGAGCTAAGCAACGGCATGGCTACATATGGCGAATACCTTGAGAGCAAAA GAAAAGATCAAACATTGGATGAAACAAAAGACAGATCAAGTCAAAAAAGATCGAATCTCAAAAAAGGGAATATGAGTAAC AGGCGAAGCAAACTAATAGAATTCATTACTGGGGCTATAAAAGCAGGAAAACGAAACTAA
Upstream 100 bases:
>100_bases TAAAGAAAGAGGCTCAAGGAGCTTGGGAGAATACAGATGAAAGTAGGAACGAAGCACGTTCGGACTAATATTGGGCTAAT TCAGAGCCCATGAACCAGCT
Downstream 100 bases:
>100_bases TTAACAATCAACTCCCTCACCATATAAGACAATGAAAAAAAAGCTCTCTATCGTAAACTCGTACTATAGAAACAGGGAAT TAATTAGACTATTTATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase Domain Family Protein; Chromosome Segregation ATPases-Like
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVDIVPDCTYQWNEIKDDQFDVV ISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEHRYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAE WFSADCADSMLVARKPYSGEAKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN RRSKLIEFITGAIKAGKRN
Sequences:
>Translated_259_residues MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVDIVPDCTYQWNEIKDDQFDVV ISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEHRYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAE WFSADCADSMLVARKPYSGEAKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN RRSKLIEFITGAIKAGKRN >Mature_259_residues MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVDIVPDCTYQWNEIKDDQFDVV ISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEHRYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAE WFSADCADSMLVARKPYSGEAKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN RRSKLIEFITGAIKAGKRN
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29782; Mature: 29782
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVD CCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCE IVPDCTYQWNEIKDDQFDVVISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEH ECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC RYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAEWFSADCADSMLVARKPYSGE CCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHCCCCCHHCEEEEECCCCCC AKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH RRSKLIEFITGAIKAGKRN HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHESSMKRMEWFIQTYLDGTTNRNILDVGSYNVNGCYKSLFQHERFKYVGLDMEAGPNVD CCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCE IVPDCTYQWNEIKDDQFDVVISGQALEHIEFFWVTMAEIVRVTKKGGFICIIAPNGFGEH ECCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC RYPVDCWRFFTDGMVALARYNQLEVHHSHTNSAPTIKEAEWFSADCADSMLVARKPYSGE CCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCHHCCCCCHHCEEEEECCCCCC AKPVNLENYKCRPSDHTELSNGMATYGEYLESKRKDQTLDETKDRSSQKRSNLKKGNMSN CCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCH RRSKLIEFITGAIKAGKRN HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA