Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is wcaE [H]

Identifier: 308535197

GI number: 308535197

Start: 1007444

End: 1008223

Strand: Direct

Name: wcaE [H]

Synonym: NA

Alternate gene names: 308535197

Gene position: 1007444-1008223 (Clockwise)

Preceding gene: 197117243

Following gene: 197117245

Centisome position: 21.83

GC content: 57.69

Gene sequence:

>780_bases
ATGGAGCAGGGAGAGTGCATGGGGAGCGATAATCCGGTAGTTTCGATTGTGACTGTGGTGAGAAACGATGCTGCGCGCCT
GCTCCGGACGCTGAACAGCGTCTCGCCCCGAAAAACCGGGAAGACGGAATACATAGTGGTAGACGGAGCATCCACCGACG
CAACGCTGGACCTCATCCGCACCCATGAGGGTACCGTGGACCGGTGGATCAGCGAGCCCGACGGCGGGATCTACGATGCC
ATGAACAAGGGGACCGCTTTATGCCGGGGAAGCTTCATCATGTTTTTGAATGCAGGGGACGAACTGCTGGTGGACGTCGC
TGAGCTCGCAGAGAAGGCCCCGCAGGGTTGCGTGCTTCAGTACGGAAAGGCCAACATGCTGTTTCCTGACGGTTCCCTGA
GCTACGTCAAGGGAAAGCGCCTCAAGACCCCGCACCGCTTCCTGAAGGGGATGCCGCTTTGCCACCAGGCGATCCTCTAC
CGCCGCGACGTCATGCCGAGCTACGACACCAGCTTCAGGATCATGAGCGACCGCCTGCTCTCCTACCGGCTGATCACCGA
TTACGGCCTGGAGCGCACCAGCTTCATAGACGCTGTGCTGGTCAACTACTACGAGGACGGTTTCAGCAACCAGGTGTCCG
CAGAGGAGTGGCGGGAGGAGCAAACCCGCTTCTACCGCAGTGTCGGCAAAAAGCACTACATCGTCATCAAACAGATCAAT
TGGTGGTTCAAGAGGTATCTCAAGTCTCCGATTTTAAAGATGTTTGAGGGAGCTCCATGA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: family glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:
NA

Sequences:

>Translated_259_residues
MEQGECMGSDNPVVSIVTVVRNDAARLLRTLNSVSPRKTGKTEYIVVDGASTDATLDLIRTHEGTVDRWISEPDGGIYDA
MNKGTALCRGSFIMFLNAGDELLVDVAELAEKAPQGCVLQYGKANMLFPDGSLSYVKGKRLKTPHRFLKGMPLCHQAILY
RRDVMPSYDTSFRIMSDRLLSYRLITDYGLERTSFIDAVLVNYYEDGFSNQVSAEEWREEQTRFYRSVGKKHYIVIKQIN
WWFKRYLKSPILKMFEGAP
>Mature_259_residues
MEQGECMGSDNPVVSIVTVVRNDAARLLRTLNSVSPRKTGKTEYIVVDGASTDATLDLIRTHEGTVDRWISEPDGGIYDA
MNKGTALCRGSFIMFLNAGDELLVDVAELAEKAPQGCVLQYGKANMLFPDGSLSYVKGKRLKTPHRFLKGMPLCHQAILY
RRDVMPSYDTSFRIMSDRLLSYRLITDYGLERTSFIDAVLVNYYEDGFSNQVSAEEWREEQTRFYRSVGKKHYIVIKQIN
WWFKRYLKSPILKMFEGAP

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788368, Length=181, Percent_Identity=33.1491712707182, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 29493; Mature: 29493

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGECMGSDNPVVSIVTVVRNDAARLLRTLNSVSPRKTGKTEYIVVDGASTDATLDLIR
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHH
THEGTVDRWISEPDGGIYDAMNKGTALCRGSFIMFLNAGDELLVDVAELAEKAPQGCVLQ
CCCCHHHHHCCCCCCCHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCEEE
YGKANMLFPDGSLSYVKGKRLKTPHRFLKGMPLCHQAILYRRDVMPSYDTSFRIMSDRLL
ECCCEEECCCCCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SYRLITDYGLERTSFIDAVLVNYYEDGFSNQVSAEEWREEQTRFYRSVGKKHYIVIKQIN
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHH
WWFKRYLKSPILKMFEGAP
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEQGECMGSDNPVVSIVTVVRNDAARLLRTLNSVSPRKTGKTEYIVVDGASTDATLDLIR
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHH
THEGTVDRWISEPDGGIYDAMNKGTALCRGSFIMFLNAGDELLVDVAELAEKAPQGCVLQ
CCCCHHHHHCCCCCCCHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCEEE
YGKANMLFPDGSLSYVKGKRLKTPHRFLKGMPLCHQAILYRRDVMPSYDTSFRIMSDRLL
ECCCEEECCCCCCHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SYRLITDYGLERTSFIDAVLVNYYEDGFSNQVSAEEWREEQTRFYRSVGKKHYIVIKQIN
HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHH
WWFKRYLKSPILKMFEGAP
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759852; 9278503 [H]