Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
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Accession | NC_011146 |
Length | 4,615,150 |
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The map label for this gene is 308535185
Identifier: 308535185
GI number: 308535185
Start: 887489
End: 888013
Strand: Direct
Name: 308535185
Synonym: NA
Alternate gene names: NA
Gene position: 887489-888013 (Clockwise)
Preceding gene: 197117146
Following gene: 197117148
Centisome position: 19.23
GC content: 65.52
Gene sequence:
>525_bases GTGCCGGCAAGGAGCATGGCCCTGAGAACGATCGTACTGGCGCTTTTGGTCCTGGTTCTGGCGGGGGGGTGCGGCTATCG CCCGGTGGTGCAGCGGGGACCGCTCGCCGAGGCCAACGGCGTGGACATCGTTCTTTTCGCCAACAAGTCGTTCCGCCCCG GGGTGGAAGGTGTGCTGGCGCGCGACCTGATAGACGAGTTCGCGCTGCGCACAGGGCGGCGGGTGCTTCCGGGGGACAAG GCTCAACTGGAGCTCTCCGGAACCGTACTTTCCTACGCCACGTCGCCGGTTTCCTACAACCGGCTAGACGCGATCCAGGA GTACTCGGCCGCCATGACCGTGCAGGCAAGCCTGCGCGAGAAGCGGACCCAGAAGGTGCTCTGGAAGGGGGAGCTGACCG AGCAGCAGGTCTACCCGGTCAACGCCAACATAGCATTGCAGCAGAACGCGGAAGAGGCCGCCGTAGCCAAGGTGACGCGC CGTCTCGCCGAGCGGATCTGGCAAAAGCTCGGGGAGCGCTTCTGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
NA
Sequences:
>Translated_174_residues MPARSMALRTIVLALLVLVLAGGCGYRPVVQRGPLAEANGVDIVLFANKSFRPGVEGVLARDLIDEFALRTGRRVLPGDK AQLELSGTVLSYATSPVSYNRLDAIQEYSAAMTVQASLREKRTQKVLWKGELTEQQVYPVNANIALQQNAEEAAVAKVTR RLAERIWQKLGERF >Mature_173_residues PARSMALRTIVLALLVLVLAGGCGYRPVVQRGPLAEANGVDIVLFANKSFRPGVEGVLARDLIDEFALRTGRRVLPGDKA QLELSGTVLSYATSPVSYNRLDAIQEYSAAMTVQASLREKRTQKVLWKGELTEQQVYPVNANIALQQNAEEAAVAKVTRR LAERIWQKLGERF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19165; Mature: 19034
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARSMALRTIVLALLVLVLAGGCGYRPVVQRGPLAEANGVDIVLFANKSFRPGVEGVLA CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHH RDLIDEFALRTGRRVLPGDKAQLELSGTVLSYATSPVSYNRLDAIQEYSAAMTVQASLRE HHHHHHHHHHCCCCCCCCCCCEEEECCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KRTQKVLWKGELTEQQVYPVNANIALQQNAEEAAVAKVTRRLAERIWQKLGERF HHHHHHHHCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PARSMALRTIVLALLVLVLAGGCGYRPVVQRGPLAEANGVDIVLFANKSFRPGVEGVLA CCHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHH RDLIDEFALRTGRRVLPGDKAQLELSGTVLSYATSPVSYNRLDAIQEYSAAMTVQASLRE HHHHHHHHHHCCCCCCCCCCCEEEECCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KRTQKVLWKGELTEQQVYPVNANIALQQNAEEAAVAKVTRRLAERIWQKLGERF HHHHHHHHCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA