Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197117148

Identifier: 197117148

GI number: 197117148

Start: 888104

End: 888508

Strand: Direct

Name: 197117148

Synonym: Gbem_0753

Alternate gene names: NA

Gene position: 888104-888508 (Clockwise)

Preceding gene: 308535185

Following gene: 308535186

Centisome position: 19.24

GC content: 58.77

Gene sequence:

>405_bases
ATGGTCAGTGAAGACATCCGCTGGCAGCAGCGGTTCAATCATTTCGAGAAGGCGTTCTTGCTGCTTCGCGATGCCGTCGC
GATACCGGTCCCCTCAGTCGTGGAACGGGCGGGGCTGATACAGTTTTTCGAGATGGCTTTCGAGCTGGCCTGGAAGGTAT
TGAAGGACTACGAAGAAGCCGAAGGGTTCAGCGTCAGGAGTCCGCGCGACGCGATCAAGCAGGCTTTCGAGGCGGGGATG
GTAACTGAAGGGCACGACTGGATCGATGCGCTGGAGGACCGCAACCTCACCACCCACACCTACAACGAAGCAACCGCCCA
GGCTGTAGAAGAAAAGATACGCCACAAGTATTTCCCGCTGCTGGAGCAGCTGCATGCGGAGTTTCGCGCCAGGGCGGGCA
GGTGA

Upstream 100 bases:

>100_bases
GCGCTTCTGAGGCTAAGCCGGGTGGAATCGATCACCTCAACGCCGCCCATTCAGCATCAGGCTGGTGGGCGGTTTTTTAA
CGACAGTTCGGGAGCAGGCC

Downstream 100 bases:

>100_bases
ACATGCCTTACGGACTCCTGGAAAGAGACCTGGAGCACATCCTCGCAGCTGTGAAATCCCTGCCTGAGATCTCTCAGCTG
GTGCTGTTCGGGTCGAGGGC

Product: nucleotidyltransferase substrate-binding protein

Products: NA

Alternate protein names: Xin-Antitoxin System Antitoxin Component; Nucleotidyltransferase Fused Substrate-Bimding Domain

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MVSEDIRWQQRFNHFEKAFLLLRDAVAIPVPSVVERAGLIQFFEMAFELAWKVLKDYEEAEGFSVRSPRDAIKQAFEAGM
VTEGHDWIDALEDRNLTTHTYNEATAQAVEEKIRHKYFPLLEQLHAEFRARAGR

Sequences:

>Translated_134_residues
MVSEDIRWQQRFNHFEKAFLLLRDAVAIPVPSVVERAGLIQFFEMAFELAWKVLKDYEEAEGFSVRSPRDAIKQAFEAGM
VTEGHDWIDALEDRNLTTHTYNEATAQAVEEKIRHKYFPLLEQLHAEFRARAGR
>Mature_134_residues
MVSEDIRWQQRFNHFEKAFLLLRDAVAIPVPSVVERAGLIQFFEMAFELAWKVLKDYEEAEGFSVRSPRDAIKQAFEAGM
VTEGHDWIDALEDRNLTTHTYNEATAQAVEEKIRHKYFPLLEQLHAEFRARAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15639; Mature: 15639

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSEDIRWQQRFNHFEKAFLLLRDAVAIPVPSVVERAGLIQFFEMAFELAWKVLKDYEEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGFSVRSPRDAIKQAFEAGMVTEGHDWIDALEDRNLTTHTYNEATAQAVEEKIRHKYFPL
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LEQLHAEFRARAGR
HHHHHHHHHHHCCC
>Mature Secondary Structure
MVSEDIRWQQRFNHFEKAFLLLRDAVAIPVPSVVERAGLIQFFEMAFELAWKVLKDYEEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGFSVRSPRDAIKQAFEAGMVTEGHDWIDALEDRNLTTHTYNEATAQAVEEKIRHKYFPL
CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LEQLHAEFRARAGR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA