Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yibL
Identifier: 30065124
GI number: 30065124
Start: 4032297
End: 4032659
Strand: Reverse
Name: yibL
Synonym: S4132
Alternate gene names: 30065124
Gene position: 4032659-4032297 (Counterclockwise)
Preceding gene: 30065125
Following gene: 30065121
Centisome position: 87.68
GC content: 50.96
Gene sequence:
>363_bases ATGAAAGAAGTCGAAAAAAACGAAATCAAGCGTCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTGTC GCTGGTTGAAGCCGCAGACAAATATGCCGAGCTGGAAAAAGAGAAAGCCACGCTGGAAGCAGAAATTGCTCGCCTGCGTG AGGTTCATAGCCAAAAACTGAGTAAAGAAGCACAGAAGCTGATGAAGATGCCGTTCCAGCGCGCAATTACCAAAAAAGAG CAGGCTGATATGGGCAAGCTGAAGAAAAGTGTTCGCGGACTGGTGGTTGTGCACCCAATGACCGCGCTGGGGCGCGAAAT GGGCCTGGAAGAGATGACTGGATTTTCTAAGACTACGTTTTAA
Upstream 100 bases:
>100_bases TGATTACGTTGCAGAACTATTACAATGTCATCAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTA TCTTTATCAGAAGCCATCAC
Downstream 100 bases:
>100_bases GCCCCTCAGACGACTGGTTCGATCGTATCAACCCGCATCTGGCTTGCCTTAGCTGGTCAATGCGGGGACTCTCCTGTCTA CTCGCCTAATTACCAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKE QADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF
Sequences:
>Translated_120_residues MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKE QADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF >Mature_120_residues MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKE QADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790030, Length=120, Percent_Identity=98.3333333333333, Blast_Score=236, Evalue=3e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021230 [H]
Pfam domain/function: PF10928 DUF2810 [H]
EC number: NA
Molecular weight: Translated: 13727; Mature: 13727
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCHHHHHCCHHCCC >Mature Secondary Structure MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]