Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yibL

Identifier: 30065124

GI number: 30065124

Start: 4032297

End: 4032659

Strand: Reverse

Name: yibL

Synonym: S4132

Alternate gene names: 30065124

Gene position: 4032659-4032297 (Counterclockwise)

Preceding gene: 30065125

Following gene: 30065121

Centisome position: 87.68

GC content: 50.96

Gene sequence:

>363_bases
ATGAAAGAAGTCGAAAAAAACGAAATCAAGCGTCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTGTC
GCTGGTTGAAGCCGCAGACAAATATGCCGAGCTGGAAAAAGAGAAAGCCACGCTGGAAGCAGAAATTGCTCGCCTGCGTG
AGGTTCATAGCCAAAAACTGAGTAAAGAAGCACAGAAGCTGATGAAGATGCCGTTCCAGCGCGCAATTACCAAAAAAGAG
CAGGCTGATATGGGCAAGCTGAAGAAAAGTGTTCGCGGACTGGTGGTTGTGCACCCAATGACCGCGCTGGGGCGCGAAAT
GGGCCTGGAAGAGATGACTGGATTTTCTAAGACTACGTTTTAA

Upstream 100 bases:

>100_bases
TGATTACGTTGCAGAACTATTACAATGTCATCAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTA
TCTTTATCAGAAGCCATCAC

Downstream 100 bases:

>100_bases
GCCCCTCAGACGACTGGTTCGATCGTATCAACCCGCATCTGGCTTGCCTTAGCTGGTCAATGCGGGGACTCTCCTGTCTA
CTCGCCTAATTACCAAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKE
QADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF

Sequences:

>Translated_120_residues
MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKE
QADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF
>Mature_120_residues
MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKE
QADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790030, Length=120, Percent_Identity=98.3333333333333, Blast_Score=236, Evalue=3e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021230 [H]

Pfam domain/function: PF10928 DUF2810 [H]

EC number: NA

Molecular weight: Translated: 13727; Mature: 13727

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCHHHHHCCHHCCC
>Mature Secondary Structure
MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIARLREVHSQKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTALGREMGLEEMTGFSKTTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]