Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is dinD

Identifier: 30065079

GI number: 30065079

Start: 3986358

End: 3987182

Strand: Reverse

Name: dinD

Synonym: S4084

Alternate gene names: 30065079

Gene position: 3987182-3986358 (Counterclockwise)

Preceding gene: 30065080

Following gene: 30065078

Centisome position: 86.69

GC content: 45.7

Gene sequence:

>825_bases
ATGAACGAACATCATCAACCTTTTGAAGAGATAAAACTGATTAATGCAAACGGAGCAGAACAATGGTCAGCAAGACAACT
TGGGAAACTACTGGGTTATTCAGAGTATCGTCACTTTATACCTGTATTAACGCGCGCCAAAGAGGCCTGTGAGAACAGTG
GTCACACAATTGATGACCATTTCGAGGAGATCCTCGATATGGTCAAAATTGGCTCAAATGCCAAAAGAGCATTAAAAGAC
ATCGTACTCTCCCGCTATGCCTGTTACCTGGTAGTACAAAACGGCGACCCCGCGAAACCGGTCATTGCGGCAGGGCAGAC
TTATTTTACTATCCAGACCCGACGGCAGGAGCTTGCTGACGATGAAGCATTTAAGCAACTTCGTGAAGACGAAAAGCGTC
TGTTTCTGAGAAATGAGTTGAAAGAACATAACAAACAATTGGTTGAGGCAGCACAGCAAGCTGGGGTAGCGACAGCTACT
GATTTCGCCATATTTCAGAATCATGGTTACCAGGGGCTGTATGGTGGATTAGATCAGAAAGCCATCCACCAACTGAAGGG
GCTGAAAAAGAGTCAGAAGATCCTGGATCATATGGGTTCAACAGAACTGGCGGCTAATCTCTTTCGAGCTACCCAAACAG
AAGAAAAACTCAAGCGGGATAGCGTGAATTCAAAACAGCAAGCTAATACCACACACTTTGACGTGGGTAGCAAGGTGAGG
CAAACCATTCAGGAACTTGGCGGAACCATACCTGAGGAGTTGCCGACCCCGCAGGTCAGCATCAAGCAGTTGGAAAACAG
TGTAAAAATTACAGAGAAGAAATAG

Upstream 100 bases:

>100_bases
TTTTTTGCCCAGCACACTGAGAACGTGAGATACTCACAACTGTATATAAATACAGTTACAGATTTACTTTCTTTGCAATC
GATATCACATGGAGTGGGCA

Downstream 100 bases:

>100_bases
CAGAAACGAAAAACTCTTTTTGTTGATTGAGACACCCGATGCGTAAGCCAAGGTCCAGGTGCAGTGAACACAATGGCTAA
ACATTGCACCTTTCTTTTCC

Product: DNA-damage-inducible protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKD
IVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAT
DFAIFQNHGYQGLYGGLDQKAIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR
QTIQELGGTIPEELPTPQVSIKQLENSVKITEKK

Sequences:

>Translated_274_residues
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKD
IVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAT
DFAIFQNHGYQGLYGGLDQKAIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR
QTIQELGGTIPEELPTPQVSIKQLENSVKITEKK
>Mature_274_residues
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKD
IVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAT
DFAIFQNHGYQGLYGGLDQKAIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR
QTIQELGGTIPEELPTPQVSIKQLENSVKITEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082303, Length=274, Percent_Identity=97.8102189781022, Blast_Score=556, Evalue=1e-160,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30981; Mature: 30981

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH
CCCCCCCHHHEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELAD
HHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCCEEEEEHHHHHHHCC
DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCHH
AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCHHHH
QTIQELGGTIPEELPTPQVSIKQLENSVKITEKK
HHHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH
CCCCCCCHHHEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFTIQTRRQELAD
HHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEECCCEEEEEHHHHHHHCC
DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHCCCCHH
AIHQLKGLKKSQKILDHMGSTELAANLFRATQTEEKLKRDSVNSKQQANTTHFDVGSKVR
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHCCHHHH
QTIQELGGTIPEELPTPQVSIKQLENSVKITEKK
HHHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 2158980; 1925027; 8195095; 8057377; 8002613 [H]