Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yicG

Identifier: 30065078

GI number: 30065078

Start: 3985450

End: 3986121

Strand: Reverse

Name: yicG

Synonym: S4083

Alternate gene names: 30065078

Gene position: 3986121-3985450 (Counterclockwise)

Preceding gene: 30065079

Following gene: 30065076

Centisome position: 86.67

GC content: 52.53

Gene sequence:

>672_bases
GTGACAATGCGCACAAATCGCTACCCTGCCAGACAGATTTTTAGGGAGAGAACCATGCTGTTACACATTTTGTATTTGGT
TGGCATTACTGCCGAAGCCATGACGGGGGCGCTGGCGGCCGGGCGACGGCGCATGGATACATTTGGCGTAATTATTATTG
CAACCGCCACCGCAATTGGCGGAGGGTCAGTGCGCGATATTCTGCTGGGCCACTATCCGCTCGGCTGGGTCAAACACCCG
GAATATGTGATTATCGTCGCTACCGCCGCAGTACTCACCACTATCGTTGCTCCTGTAATGCCTTACCTGCGCAAAGTGTT
TCTGGTGCTCGATGCGCTCGGACTGGTGGTCTTTTCTATCATCGGCGCACAGGTTGCACTGGATATGGGGCACGGCCCAA
TTATTGCCGTTGTCGCGGCGGTAACCACCGGTGTATTTGGCGGCGTTTTGCGCGATATGTTCTGTAAACGCATTCCGCTG
GTCTTTCAAAAAGAGTTGTATGCCGGTGTCTCATTTGCCTCCGCCGTGCTGTACATCGCGCTGCAACACTATGTTTCTAA
CCATGATGTGGTGATTATCTCCACCCTGGTATTCGGCTTTTTTGCTCGTTTACTGGCGCTACGTCTTAAGCTGGGATTAC
CGGTCTTTTACTACAGCCACGAAGGTCACTAA

Upstream 100 bases:

>100_bases
CTCAGACAAGAAGTCAGAAGAATGCATCTACGCTACAGAAAATAGCGATTTCACATAACTAAAAGTTATCAATTTCCTCT
CACCTTAAAAAATATCAATC

Downstream 100 bases:

>100_bases
GGTTCAAAACCTGTGATCTGCTGGGCAGCCAGCCAACTGCCCAGCTTCTTGATTTGCGCATTTTCCTTCCATTCAATAAC
CTGTCTGGCGCGCCCAGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTMRTNRYPARQIFRERTMLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHP
EYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPL
VFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH

Sequences:

>Translated_223_residues
MTMRTNRYPARQIFRERTMLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHP
EYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPL
VFQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH
>Mature_222_residues
TMRTNRYPARQIFRERTMLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGGSVRDILLGHYPLGWVKHPE
YVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSIIGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLV
FQKELYAGVSFASAVLYIALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=205, Percent_Identity=100, Blast_Score=402, Evalue=1e-113,
Organism=Escherichia coli, GI1786352, Length=208, Percent_Identity=37.0192307692308, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 24359; Mature: 24227

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMRTNRYPARQIFRERTMLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHCC
GGSVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
CCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC
>Mature Secondary Structure 
TMRTNRYPARQIFRERTMLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHCC
GGSVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
CCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLYIA
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
LQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH
HHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]