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The map label for this gene is yicH

Identifier: 30065069

GI number: 30065069

Start: 3972910

End: 3974619

Strand: Reverse

Name: yicH

Synonym: S4074

Alternate gene names: 30065069

Gene position: 3974619-3972910 (Counterclockwise)

Preceding gene: 30065070

Following gene: 30065067

Centisome position: 86.42

GC content: 54.33

Gene sequence:

>1710_bases
ATGAAATTTATTGGGAAGCTGCTTCTCTACATTCTCATCGCTCTGTTAGTGGTGATCGCTGGCCTCTATTTTCTTCTGCA
AACCCGCTGGGGAGCAGAACATATCAGCGCATGGGTTTCCGAGAATAGCGACTATCATCTGGCCTTCGGGGCGATGGATC
ACCGTTTTTCCGCGCCATCTCATATCGTGCTGGAGAATGTCACGTTTGGTCGTGATGGTCAGCCCGCGCCCCTGGTGGCA
AAAAGTGTCGACATTGCGCTAAGCAGTCGCCAACTGACCGAACCACGCCATGTCGATACCATCCTGCTGGAAAACGGGAC
GCTGAATCTCACCGACCAGACCGCGCCGCTACCGTTCAAAGCCGATCGTCTGCAACTGCGTGATATGGCGTTTAATAGCC
CGAATAGCGAATGGAAACTGAGCGCGCAGCGGGTAAATGGCGGCGTGGTTCCGTGGTCACCAGAAGCCGGTAAAGTGCTG
GGTACGAAGGCGCAGATTCAGTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGG
CAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGC
GTAACGCCGACGGCAGCTGGCAAGTGGAAAATCTGCGCATGGCGGATATCCGTCTACAAAGCGAAAAATCGCTAACCGAC
TTCTTTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCTTGGAAGTCATCGATGCTCGTCTGCAAGGTCCGGA
CTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAAC
TGTCGATGAACGCCAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACGCGGAATTTTCCCCGCAG
GGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAGGGAACTGGCTGCGTGACGGTAA
AACGTTGATCCTTGATGATGCGGCAATTGCCGGGCTGGAATATACCTTGCCGAAAAACTGGCAACAGTTGTGGATGGAAA
CGACACCCGGTTGGTTAAACAGCCTGCAACTGAAGAGATTTAGCGCCAGCCGCAATCTGATCATTGATATCGACCCTGAC
TTCCCGTGGCAGCTCACCGCGCTCGATGGTTACGGTGCCAACCTGACGCTGGTTACCGATCATAAATGGGGCGTCTGGAG
TGGCTCGGCGAATCTGAATGCCGCCGCCGCGACATTCAATCGTGTTGATGTTCGTCGCCCGTCGCTGGCGCTGACCGCCA
ACAGCAGCACGGTGAATATCAGCGAACTGAGTGCATTTACTGAAAAAGGCATTCTGGAAGCCACCGCAAGTGTTTCACAA
ACGCCACAACGTCAGACCCATATCAGCCTGAATGGACGCGGTGTGCCGGTGAATATTTTGCAACAATGGGGATGGCCTGA
ATTACCGTTGACTGGCGACGGCAATATTCAGCTTACCGCCAGTGGAGATATTCAGGCCAATGCCCCGCTGAAACCTACGG
TTAGCGGGCAATTGCATGCCGTGAACGCCGCAAAGCAGCAAGTGACTCAAACCATGAATGCGGGCGTCGTTTCCAGCGGT
GAAGTTACATCGACGGAGCCGGTGCGGTAA

Upstream 100 bases:

>100_bases
AATTACCGCCGCAGTCTCACCTCTTTCACCATTCCCGCCTTGAGGATTGCGCGTAAATCGTGCATAACTCCCTTATGTGC
ATTTCACGGGATGGAAGACC

Downstream 100 bases:

>100_bases
ACATCAATCTCGCCGGGTACGACTCAGACGTACCCGGCATTCCGTCAATAGATTACAACGTAATTGTCAGCGCATTCCCT
TGAGGCGTCACCACCAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPAPLVA
KSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVL
GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQ
GVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPD
FPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
TPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGVVSSG
EVTSTEPVR

Sequences:

>Translated_569_residues
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPAPLVA
KSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVL
GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQ
GVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPD
FPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
TPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGVVSSG
EVTSTEPVR
>Mature_569_residues
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPSHIVLENVTFGRDGQPAPLVA
KSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVL
GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASEFIYGSLHLFDPIINAEFSPQ
GVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPD
FPWQLTALDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
TPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGVVSSG
EVTSTEPVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790088, Length=569, Percent_Identity=98.9455184534271, Blast_Score=1141, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 62226; Mature: 62226

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC
HIVLENVTFGRDGQPAPLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFK
EEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC
ADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVLGTKAQIQFSAGSLSLNDVPA
CCCEEEEHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCEEEEEEECCCEEECCCCC
TNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
CEEEEECCCCCCEEEEEECCCHHHCCEECCCCCCCCCCCEEEEEEEEEEEEECCCCHHHH
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASE
HHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCEECCCCCCCCCCEEECCHHH
FIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLE
EEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCEEECCCEEEEECHHCCCEE
YTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTD
EECCCCHHHHHHCCCCCHHHHHEEEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEEEC
HKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
CCCEEEECCCCCCCHHEEECEEECCCCCEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHC
TPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANAPLKPTVSGQLHA
CCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEE
VNAAKQQVTQTMNAGVVSSGEVTSTEPVR
EHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSDYHLAFGAMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCC
HIVLENVTFGRDGQPAPLVAKSVDIALSSRQLTEPRHVDTILLENGTLNLTDQTAPLPFK
EEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCEEEECCCCCCCCCC
ADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPEAGKVLGTKAQIQFSAGSLSLNDVPA
CCCEEEEHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEECCEEEEEEECCCEEECCCCC
TNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADGSWQVENLRMADIRLQSEKSLTD
CEEEEECCCCCCEEEEEECCCHHHCCEECCCCCCCCCCCEEEEEEEEEEEEECCCCHHHH
FFAPLRSVPSLQIGRLEVIDARLQGPDWAVTDLDLSLRNMTFSKDDWQTQEGKLSMNASE
HHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEECEEEECCEECCCCCCCCCCEEECCHHH
FIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGGMVRTSGNWLRDGKTLILDDAAIAGLE
EEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCEEECCCEEEEECHHCCCEE
YTLPKNWQQLWMETTPGWLNSLQLKRFSASRNLIIDIDPDFPWQLTALDGYGANLTLVTD
EECCCCHHHHHHCCCCCHHHHHEEEEECCCCCEEEECCCCCCEEEEEECCCCCEEEEEEC
HKWGVWSGSANLNAAAATFNRVDVRRPSLALTANSSTVNISELSAFTEKGILEATASVSQ
CCCEEEECCCCCCCHHEEECEEECCCCCEEEEECCCEEEHHHHHHHHHCCHHHHHHHHHC
TPQRQTHISLNGRGVPVNILQQWGWPELPLTGDGNIQLTASGDIQANAPLKPTVSGQLHA
CCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEE
VNAAKQQVTQTMNAGVVSSGEVTSTEPVR
EHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]