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The map label for this gene is 30065060

Identifier: 30065060

GI number: 30065060

Start: 3961705

End: 3962031

Strand: Direct

Name: 30065060

Synonym: S4062

Alternate gene names: NA

Gene position: 3961705-3962031 (Clockwise)

Preceding gene: 161486393

Following gene: 30065061

Centisome position: 86.14

GC content: 54.13

Gene sequence:

>327_bases
ATGACTAAAAATACTCGTTTTTCCCCCGAAGTCCGTCAACGGGCAGTCCGTATGGTTCTGGAAAGTCAGGGCGAATATGA
CTCACAATGGGCGACAATTTGTTCCATTGCTCCAAAGATTGGCTGTACGCCGGAGACTCTGCGTGTCCGGGTTCGCCAGC
ATGAGCGGGATACCGGGGGCGGTGATGGAGGGCTCACCACCGCTGAACGTCAGCGTCTGAAAGAGCTGGAGCGTGAAAAT
CGTGAACTGCGCCGCAGTAACGATATCCTTCGCCAGGCTTCCGCTTATTTTGCGAAGGCGGAGTTTGACCGCCTCTGGAA
AAAATGA

Upstream 100 bases:

>100_bases
CCCACGAAAAGGAATTATTTTCAATAGAACCTTGCTTACCAAAGGTTGAACCGCCCCGGGAATCCTGGAGACTAAACTTC
CTGAGAAAGAGGTAAACAGG

Downstream 100 bases:

>100_bases
TGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGCTATGCAGCGAACTGCATATTGCCCCGTCAACGTAT
TACCACTGTCAGCAACAGCG

Product: IS629 orfA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVRVRQHERDTGGGDGGLTTAERQRLKELEREN
RELRRSNDILRQASAYFAKAEFDRLWKK

Sequences:

>Translated_108_residues
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVRVRQHERDTGGGDGGLTTAERQRLKELEREN
RELRRSNDILRQASAYFAKAEFDRLWKK
>Mature_107_residues
TKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVRVRQHERDTGGGDGGLTTAERQRLKELERENR
ELRRSNDILRQASAYFAKAEFDRLWKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family

Homologues:

Organism=Homo sapiens, GI310129419, Length=49, Percent_Identity=61.2244897959184, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIS3_SHIFL (P0A1V2)

Other databases:

- EMBL:   AE014073
- RefSeq:   NP_839231.1
- ProteinModelPortal:   P0A1V2
- SMR:   P0A1V2
- EnsemblBacteria:   EBESCT00000085636
- GeneID:   1080270
- GenomeReviews:   AE014073_GR
- KEGG:   sfx:S4062
- GeneTree:   EBGT00070000031685
- HOGENOM:   HBG756815
- ProtClustDB:   CLSK862064
- InterPro:   IPR002514

Pfam domain/function: PF01527 Transposase_8

EC number: NA

Molecular weight: Translated: 12583; Mature: 12452

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVRVRQHERDTGG
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
GDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVRVRQHERDTGG
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCC
GDGGLTTAERQRLKELERENRELRRSNDILRQASAYFAKAEFDRLWKK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704152