Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yieI
Identifier: 30065027
GI number: 30065027
Start: 3921375
End: 3921848
Strand: Direct
Name: yieI
Synonym: S4028
Alternate gene names: 30065027
Gene position: 3921375-3921848 (Clockwise)
Preceding gene: 30065026
Following gene: 30065028
Centisome position: 85.26
GC content: 44.09
Gene sequence:
>474_bases ATGTCTGTTTCACGTCGGGTAATACATCACGGACTTTATTTTGCGGTTTTAGGACCGTTAATTGGTGTTCTGTTTCTTGT CCTCTACATATTCTTCGCAAAAGAACCGCTGGTTCTTTTGGTAATAATACAGGTACTTCCATTGTTTCTCTTATTGTCGA TTACTACGGGAGCTATTCCTGCATTGTTAACCGGCGTGATGGTCGCCTGTCTGCCGGAAAAGATCGGGTCACAGAAAAAT TATCGTTGTCTGGCTGGTGGCATAGGTGGCGTCGTTATCACCGAGATCTATTGTGCAGTTATTGTACATATTAAGGGCAT GGCTTCCTCGGAGTTGTTTGAAAACATTCTTTCTGGTGACAGTCTCGTTGTCCGCATCATTCCTGCATTGCTGGCAGGTG TGGTGATGAGCAGAATCATTACCCGTCTGCCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAAGTTAA
Upstream 100 bases:
>100_bases GTGGAAAGCGCGTGGTTGGGATATTACGGCATAGTTCTTCACACTCCCTTCACTTACCCCGCTTAAATTGGCGCTCAAAG GTAAGTAAAGGGAGTTTGAT
Downstream 100 bases:
>100_bases GCGGGATACTTTATCTTTGGGCTACTCAAAAGCAGACAGGATGTTACTATGACTCAAAATATCAGGCCGTTACCCCAATT CAAATGTAAGCGCCCCATCA
Product: putative inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLVIIQVLPLFLLLSITTGAIPALLTGVMVACLPEKIGSQKN YRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGDSLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS
Sequences:
>Translated_157_residues MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLVIIQVLPLFLLLSITTGAIPALLTGVMVACLPEKIGSQKN YRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGDSLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS >Mature_156_residues SVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLVIIQVLPLFLLLSITTGAIPALLTGVMVACLPEKIGSQKNY RCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGDSLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbrB family [H]
Homologues:
Organism=Escherichia coli, GI1790152, Length=157, Percent_Identity=96.1783439490446, Blast_Score=290, Evalue=4e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020222 - ProDom: PD092472 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16772; Mature: 16640
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLVIIQVLPLFLLLSITTGAIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALLTGVMVACLPEKIGSQKNYRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGD HHHHHHHHHHHHHHHCCCCCCEEHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC SLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SVSRRVIHHGLYFAVLGPLIGVLFLVLYIFFAKEPLVLLVIIQVLPLFLLLSITTGAIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ALLTGVMVACLPEKIGSQKNYRCLAGGIGGVVITEIYCAVIVHIKGMASSELFENILSGD HHHHHHHHHHHHHHHCCCCCCEEHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC SLVVRIIPALLAGVVMSRIITRLPGLDISCPETDSLS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA