Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is uhpB
Identifier: 30064981
GI number: 30064981
Start: 3870498
End: 3872000
Strand: Reverse
Name: uhpB
Synonym: S3975
Alternate gene names: 30064981
Gene position: 3872000-3870498 (Counterclockwise)
Preceding gene: 30064982
Following gene: 30064980
Centisome position: 84.19
GC content: 56.95
Gene sequence:
>1503_bases ATGAAGACGTTGTTCTCCCGCTTAATTACCGTTATTGCCTGCTTTTTTATCTTCTCTGCCGCATGGTTTTGCCTATGGAG TATCAGCCTGCATCTGGTTGAGCGCCCTGATATGGCGGTGCTGTTATTTCCGTTTGGTCTGCGTCTGGGGCTAATGCTGC AATGCCCGCGCGGATACTGGCCCGTATTGCTGGGTGCGGAGTGGCTGCTGATTTACTGGCTAACGCAGGCGGTCGGTTTA ACCCATTTTCCGTTATTGATGATCGGTAGTTTGCTGACGTTACTGCCCGTAGCGCTGATCTCGCGCTATCGCCATCAGCG TGACTGGCGCACCTTGCTGTTACAGGGTGCGGCGTTAACGGCGGCGGCGTTGTTGCAGTCGCTGCCCTGGCTTTGGCACG GCAAAGAGTCGTGGAATGCGCTGTTGCTGACTTTAACTGGCGGTCTGACGCTGGCCCCGATATGTCTGGTGTTCTGGCAC TATCTCGCCAATAACACCTGGCTGCCGCTCGGCCCGTCACTGGTTTCTCAGCCCATCAACTGGCGCGGGCGGCATCTGGT CTGGTACTTGCTGCTGTTTGTTATCAGTCTCTGGCTCCAGTTGGGATTGCCGGACGAACTGTCGCGCTTTACGCCATTCT GTCTGGCGCTGCCGATTATCGCGCTGGCCTGGCACTATGGCTGGCAAGGAGCGCTGATTGCGACGTTGATGAACGCCATC GCGCTGATCGCCAGTCAAACCTGGCGCGATCATCTGGTGGATTTATTACTCTCGTTGCTGGTGCAAAGTCTGACAGGGTT GTTACTGGGCGCAGGCATCCAGCGGTTGCGTGAACTTAACCAGTCGCTACAAAAGGAACTGGCGCGCAATCAGCATCTGG CTGAACGTTTGTTAGAAACCGAAGAGAGCGTGCGCCGCGACGTGGCGCGTGAGCTGCACGACGATATCGGTCAGACCATC ACTGCTATTCGTACTCAGGCGGGCATTGTTCAGCGGCTGGCGGCAGATAACGCCAGTGTGAAGCAGAGCGGGCAGCTCAT CGAACAACTGTCGCTGGGCGTTTACGACGCGGTGCGCCGTTTGTTAGGACGGTTACGTCCGCGCCAGCTGGATGATCTCA CCCTGGAGCAGGCCATCCGCTCACTGATGCGGGAAATGGAGCTGGAAGGGCGCGGCATTGTCAGCCATCTCGAATGGCGT ATCGATGAATCAGCATTAAGCGAAAACCAGCGCGTGACGCTGTTTCGTGTCTGCCAGGAAGGGCTGAACAACATTGTGAA ACATGCCGATGCCAGCGCGGTTACGCTGCAAGGCTGGCAGCAGGATGAACGGTTGATGCTGGTGATTGAAGACGATGGCA GCGGTTTGCCGCCGGGTTCCGGGCAACAAGGTTTTGGCCTCACCGGAATGCGCGAGCGCGTAACGGCGCTGGGCGGCACA TTACACATTTCCTGTCTGCACGGCACGCGTGTCAGCGTTTCTCTACCTCAACGTTATGTCTAA
Upstream 100 bases:
>100_bases TGTCACCGAAAACGGTACACGTCCATCGCGCCAATCTGATGGAAAAACTGGGCGTCAGTAACGACGTAGAGCTGGCGCGC CGCATGTTTGATGGCTGGTG
Downstream 100 bases:
>100_bases GGTTCGATGATGTTGCCGTTTCTGAAAGCGCCTGCCGATGCGCCATTAATGACTGATAAACATGAAATTGATGCCCGTTA TCGCTACTGGCGTCGGCATA
Product: sensory histidine kinase UhpB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGL THFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI ALIASQTWRDHLVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI TAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT LHISCLHGTRVSVSLPQRYV
Sequences:
>Translated_500_residues MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGL THFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI ALIASQTWRDHLVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI TAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT LHISCLHGTRVSVSLPQRYV >Mature_500_residues MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGL THFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI ALIASQTWRDHLVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTI TAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWR IDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT LHISCLHGTRVSVSLPQRYV
Specific function: Member of the two-component regulatory system uhpB/uhpA involved in the regulation of the uptake of hexose phosphates. UhpB functions as a membrane-associated protein kinase that phosphorylates uhpA in response to environmental signals [H]
COG id: COG3851
COG function: function code T; Signal transduction histidine kinase, glucose-6-phosphate specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=500, Percent_Identity=99.8, Blast_Score=989, Evalue=0.0, Organism=Escherichia coli, GI1788812, Length=214, Percent_Identity=32.7102803738318, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787474, Length=219, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR007895 - InterPro: IPR011712 - InterPro: IPR005467 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; PF05231 MASE1 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56323; Mature: 56323
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHEECCCCCC PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN HHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALIASQTWRDHLVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHH GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT HHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC LHISCLHGTRVSVSLPQRYV EEEEEECCCEEEECCCCCCC >Mature Secondary Structure MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFPFGLRLGLMLQCPRGYW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHEECCCCCC PVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISRYRHQRDWRTLLLQGAALT HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWHYLANNTWLPLGPSLVSQPIN HHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC WRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALPIIALAWHYGWQGALIATLMNAI CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALIASQTWRDHLVDLLLSLLVQSLTGLLLGAGIQRLRELNQSLQKELARNQHLAERLLET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EESVRRDVARELHDDIGQTITAIRTQAGIVQRLAADNASVKQSGQLIEQLSLGVYDAVRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH LLGRLRPRQLDDLTLEQAIRSLMREMELEGRGIVSHLEWRIDESALSENQRVTLFRVCQE HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHH GLNNIVKHADASAVTLQGWQQDERLMLVIEDDGSGLPPGSGQQGFGLTGMRERVTALGGT HHHHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCC LHISCLHGTRVSVSLPQRYV EEEEEECCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3301805; 1569007; 7686882; 9278503 [H]