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The map label for this gene is yifE

Identifier: 30064937

GI number: 30064937

Start: 3815386

End: 3815724

Strand: Reverse

Name: yifE

Synonym: S3920

Alternate gene names: 30064937

Gene position: 3815724-3815386 (Counterclockwise)

Preceding gene: 30064941

Following gene: 30064936

Centisome position: 82.96

GC content: 48.08

Gene sequence:

>339_bases
ATGGCGGAAAGCTTTACGACGACTAATCGATATTTCGACAATAAACATTATCCACGTGGATTCTCTCGTCATGGTGATTT
CACCATCAAAGAGGCACAACTGCTTGAGCGTCATGGTTATGCCTTCAATGAGTTGGATCTTGGCAAACGCGAGCCGGTTA
CCGAGGAAGAGAAACTCTTCGTAGCAGTATGCCGTGGCGAACGTGAGCCAGTGACAGAAGCAGAACGCGTGTGGTCCAAG
TATATGACGCGTATTAAGCGTCCAAAACGTTTTCACACCCTTTCCGGCGGTAAACCGCAGGTTGAAGGTGCTGAAGACTA
CACCGATTCTGACGATTAA

Upstream 100 bases:

>100_bases
ATTTGTCGTTATGATTTAAATGTTTTGTTTTACACTCTGTCAAGCGTAACTAATACTCCGCGCCATAACTAGCTCGGTCA
AAGAATTAGGAGCGTGCAGG

Downstream 100 bases:

>100_bases
TAAAAAGGGCGAAATGCCCTTTTTTTATGTCAGTAGTTTTTGCAGATGGATGAGCAAACGGTCAATCGCACGATAGCTAA
CTGCCTCCTGCAAATGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSK
YMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD

Sequences:

>Translated_112_residues
MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSK
YMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD
>Mature_111_residues
AESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKY
MTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD

Specific function: Unknown

COG id: COG3085

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0438 family

Homologues:

Organism=Escherichia coli, GI2367277, Length=112, Percent_Identity=100, Blast_Score=234, Evalue=1e-63,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): YIFE_ECO57 (P0ADN4)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C91216
- PIR:   D86062
- RefSeq:   NP_290396.1
- RefSeq:   NP_312726.1
- ProteinModelPortal:   P0ADN4
- EnsemblBacteria:   EBESCT00000026342
- EnsemblBacteria:   EBESCT00000059459
- GeneID:   915294
- GeneID:   960404
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5276
- KEGG:   ecs:ECs4699
- GeneTree:   EBGT00050000011690
- HOGENOM:   HBG297174
- OMA:   RRPKRFH
- ProtClustDB:   PRK11027
- BioCyc:   ECOL83334:ECS4699-MONOMER
- InterPro:   IPR007335

Pfam domain/function: PF04219 DUF413

EC number: NA

Molecular weight: Translated: 13134; Mature: 13002

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLF
CCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEE
VAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNELDLGKREPVTEEEKLF
CCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEE
VAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVEGAEDYTDSDD
EEEECCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796