Click here to switch to the map view.

The map label for this gene is smg

Identifier: 30064606

GI number: 30064606

Start: 3404956

End: 3405414

Strand: Reverse

Name: smg

Synonym: S3540

Alternate gene names: 30064606

Gene position: 3405414-3404956 (Counterclockwise)

Preceding gene: 30064607

Following gene: 30064605

Centisome position: 74.04

GC content: 46.62

Gene sequence:

>459_bases
ATGTATTTGTTTGAAACCTATATTCACACTGAAGCTGAGTTGCGTGTGGATCAAGACAAACTTGAACAGGATCTTACCGA
CGCAGGTTTTGAGCGAGAAGATATCTACAATGCCCTGCTATGGCTGGAAAAACTTGCTGATTATCAGGAAGGGTTGGCAG
AACCGATGCAACTGGCCTCGGATCCTCTCTCCATGCGTATTTATACACCGGAAGAGTGTGAACGACTGGATGCCAGCTGC
CGTGGGTTTCTGCTTTTCCTTGAGCAGATTCAGGTGCTCAACCTTGAAACTCGTGAAATGGTGATAGAGCGAGTGCTCGC
GCTGGATAACGCAGAGTTCGAACTGGATGATCTGAAATGGGTGATCCTGATGGTGTTGTTCAACATCCCGGGCTGCGAAA
ATGCGTACCAGCAAATGGAAGAATTACTCTTTGAAGTGAATGAAGGTATGCTGCATTAA

Upstream 100 bases:

>100_bases
GTAGTTACTCAACTACTCGAACTGGAGTTAGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGTCCGATTGAGGAGGGC
ATGCCATGTTCGACGTACTA

Downstream 100 bases:

>100_bases
TCATTTCTTTAATTCAGCATAAGTTGTTATGGCAAAATCAGCACTGTTCACGGTGCGTAATAATGAGTCCTGCCCAAAGT
GCGGGGCTGAACTGGTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASC
RGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH

Sequences:

>Translated_152_residues
MYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASC
RGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH
>Mature_152_residues
MYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLASDPLSMRIYTPEECERLDASC
RGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH

Specific function: Unknown

COG id: COG2922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smg family [H]

Homologues:

Organism=Escherichia coli, GI1789679, Length=152, Percent_Identity=100, Blast_Score=306, Evalue=3e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007456 [H]

Pfam domain/function: PF04361 DUF494 [H]

EC number: NA

Molecular weight: Translated: 17905; Mature: 17905

Theoretical pI: Translated: 3.79; Mature: 3.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLAS
CCEEHHHHHCHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKW
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
VILMVLFNIPGCENAYQQMEELLFEVNEGMLH
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYLFETYIHTEAELRVDQDKLEQDLTDAGFEREDIYNALLWLEKLADYQEGLAEPMQLAS
CCEEHHHHHCHHHHEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLETREMVIERVLALDNAEFELDDLKW
CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHH
VILMVLFNIPGCENAYQQMEELLFEVNEGMLH
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA