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The map label for this gene is agaE

Identifier: 30064472

GI number: 30064472

Start: 3263146

End: 3263955

Strand: Direct

Name: agaE

Synonym: S3385

Alternate gene names: 30064472

Gene position: 3263146-3263955 (Clockwise)

Preceding gene: 30064471

Following gene: 30064473

Centisome position: 70.95

GC content: 52.47

Gene sequence:

>810_bases
ATGGCATCTAATCAAACCACCCTGCCGAACGTCAGCGAAAATGAAGAAACACTGCTGACTGGCGTCAATGAAAACGTGTA
TGAAGATCGGAGCATTGCCGCGGAGCTGACGAAAAAAGATATCAACCGCGTCGCCTGGCGTTCCATGCTGTTACAAGCGT
CTTTTAACTACGAACGTATGCAGGCTTCTGGCTGGTTGTACGGTCTGCTGCCTGCTCTGAAAAAGATCCACACTAATAAA
CGCGACCTGGCGCGCGCCATGAAGGGGCATATGGGTTTCTTCAATACCCATCCGTTTCTGGTGACGTTTGTTATCGGCAT
TATCCTTGCGATGGAGCGTTCTAAGCAGGACGTTAACAGTATTCAGAGCACCAAAATTGCCGTCGGTGCGCCGCTTGGCG
GGATTGGCGATGCGATGTTCTGGCTAACGCTACTGCCGATTTGTGGCGGGATAGGCGCAAGCCTCGCGCTACAAGGCTCT
ATTCTTGGCGCAGTCGTCTTTATTGTGCTGTTCAACGTGGTACACTTGGGGCTGCGTTTTGGTCTGGCGCATTATGCTTA
CCGCATGGGCGTGGCGGCGATTCCCCTTATTAAAGCGAATACCAAAAAAGTCGGCCATGCTGCGTCAATCGTTGGAATGA
CGGTAATCGGCGCACTGGTGGCAACCTATGTTCGTTTAAGCACCACGCTGGAAATCACGGCGGGCGACGCAGTAGTTAAG
TTACAGGCTGATGTTATCGACAAACTGATGCCTGCCTTCTTACCGCTGGTCTACACCCTGACCATGTTCTGGCTGGTACG
CCGCGGCTAG

Upstream 100 bases:

>100_bases
CTGGCTATTGCTGCCGCCGCGCTGGCGATGGCGCTGATCGATCTGCTGCGTAAATCTCCTGAACCGACTCAACCTGCGGC
ACAGAAAGAGGAATTTGAAG

Downstream 100 bases:

>100_bases
AGTCCGCTGCGCCTGATTGCGGTTACCGTGGTTCTAGGGATCGTCGGTAAATTCTGCCATTTCCTTTAAATACAATGAGG
TATTAGATGTTAAGTATTAT

Product: putative transport enzyme subunit

Products: NA

Alternate protein names: EIID-Aga; PTS system N-acetylgalactosamine-specific EIID component [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MASNQTTLPNVSENEETLLTGVNENVYEDRSIAAELTKKDINRVAWRSMLLQASFNYERMQASGWLYGLLPALKKIHTNK
RDLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGS
ILGAVVFIVLFNVVHLGLRFGLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVK
LQADVIDKLMPAFLPLVYTLTMFWLVRRG

Sequences:

>Translated_269_residues
MASNQTTLPNVSENEETLLTGVNENVYEDRSIAAELTKKDINRVAWRSMLLQASFNYERMQASGWLYGLLPALKKIHTNK
RDLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGS
ILGAVVFIVLFNVVHLGLRFGLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVK
LQADVIDKLMPAFLPLVYTLTMFWLVRRG
>Mature_268_residues
ASNQTTLPNVSENEETLLTGVNENVYEDRSIAAELTKKDINRVAWRSMLLQASFNYERMQASGWLYGLLPALKKIHTNKR
DLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNSIQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGSI
LGAVVFIVLFNVVHLGLRFGLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVKL
QADVIDKLMPAFLPLVYTLTMFWLVRRG

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3716

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIID domain [H]

Homologues:

Organism=Escherichia coli, GI1789529, Length=238, Percent_Identity=43.6974789915966, Blast_Score=213, Evalue=8e-57,
Organism=Escherichia coli, GI1788122, Length=246, Percent_Identity=34.1463414634146, Blast_Score=160, Evalue=8e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004704
- InterPro:   IPR018405 [H]

Pfam domain/function: PF03613 EIID-AGA [H]

EC number: NA

Molecular weight: Translated: 29262; Mature: 29131

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS51108 PTS_EIID

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNQTTLPNVSENEETLLTGVNENVYEDRSIAAELTKKDINRVAWRSMLLQASFNYERM
CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNS
HHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGSILGAVVFIVLFNVVHLGLRF
HHHCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVK
HHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEE
LQADVIDKLMPAFLPLVYTLTMFWLVRRG
EHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASNQTTLPNVSENEETLLTGVNENVYEDRSIAAELTKKDINRVAWRSMLLQASFNYERM
CCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QASGWLYGLLPALKKIHTNKRDLARAMKGHMGFFNTHPFLVTFVIGIILAMERSKQDVNS
HHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
IQSTKIAVGAPLGGIGDAMFWLTLLPICGGIGASLALQGSILGAVVFIVLFNVVHLGLRF
HHHCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAHYAYRMGVAAIPLIKANTKKVGHAASIVGMTVIGALVATYVRLSTTLEITAGDAVVK
HHHHHHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEE
LQADVIDKLMPAFLPLVYTLTMFWLVRRG
EHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10931310; 9278503; 8932697 [H]