| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is insA [H]
Identifier: 30064399
GI number: 30064399
Start: 3170300
End: 3170599
Strand: Direct
Name: insA [H]
Synonym: S3295
Alternate gene names: 30064399
Gene position: 3170300-3170599 (Clockwise)
Preceding gene: 30064397
Following gene: 30064403
Centisome position: 68.93
GC content: 54.0
Gene sequence:
>300_bases GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACA TCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTACGCACC AGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTT TTACGTCACTTAAAAACTCAGGCCGCAGTCGGTAACCTCGCGCATACAACCGGGCAGTGA
Upstream 100 bases:
>100_bases TATTCCAAGGTAAATATTGCGTCACTAAATGGACATTGGAGTGACGGTAATGCTGCCAACTTACTGATTTAGTGTATGAT GGTGATTTTAAGGTGCTTGC
Downstream 100 bases:
>100_bases TGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGGTGCTAAATCACGTCAGCGCTGGCTGTTTTACGCG TATGACAGGATACGGAGGAC
Product: IS1 orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTV LRHLKTQAAVGNLAHTTGQ
Sequences:
>Translated_99_residues MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTV LRHLKTQAAVGNLAHTTGQ >Mature_98_residues ASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTVL RHLKTQAAVGNLAHTTGQ
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI1790747, Length=85, Percent_Identity=97.6470588235294, Blast_Score=174, Evalue=1e-45, Organism=Escherichia coli, GI1789852, Length=85, Percent_Identity=94.1176470588235, Blast_Score=173, Evalue=2e-45, Organism=Escherichia coli, GI1788204, Length=85, Percent_Identity=94.1176470588235, Blast_Score=173, Evalue=2e-45, Organism=Escherichia coli, GI1786204, Length=85, Percent_Identity=94.1176470588235, Blast_Score=173, Evalue=2e-45, Organism=Escherichia coli, GI87081814, Length=85, Percent_Identity=92.9411764705882, Blast_Score=172, Evalue=4e-45, Organism=Escherichia coli, GI1786471, Length=85, Percent_Identity=92.9411764705882, Blast_Score=172, Evalue=4e-45, Organism=Escherichia coli, GI1786460, Length=85, Percent_Identity=92.9411764705882, Blast_Score=172, Evalue=4e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012287 - InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 10630; Mature: 10499
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMA CCCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH MNGVGCRASARIMGVGLNTVLRHLKTQAAVGNLAHTTGQ HCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMA CCEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH MNGVGCRASARIMGVGLNTVLRHLKTQAAVGNLAHTTGQ HCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]