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The map label for this gene is 30064332

Identifier: 30064332

GI number: 30064332

Start: 3110259

End: 3110609

Strand: Direct

Name: 30064332

Synonym: S3225

Alternate gene names: NA

Gene position: 3110259-3110609 (Clockwise)

Preceding gene: 30064331

Following gene: 30064333

Centisome position: 67.62

GC content: 50.71

Gene sequence:

>351_bases
ATGGGGCTATACGATAAATATGCGCGCCTTGCTGGCGAGCGTCTGCAATTTAGTGACAACGGGTTAACACCGTTTGGCAC
CTGTATTGATGAAGTGTATTCCGCCACCGAAGGCCGGATCGGCAATAAAAAAGTGATTCTGGCCGGGACCAATAATTATC
TCGGTTTAACCTTTAATCATGATGCCATCAGCGAAGGTCAGGCCGCGTTAGCGGCCCAAGGCACCGGCACCACCGGTTCT
CGTATGGCAAACGGCAGTTATGCGCCGCACCTGGCGTTAGAGAAAGAGATTGCCGAGTTTTTCAATCGCCCTACCGCTAT
CGTTTTTCAACCGGTTATACCGCTAATTTAG

Upstream 100 bases:

>100_bases
AAGACAGATTCGATATTTCCATTCCTATTAATATTCTGCTGGATGTCAAAACCCCTGCGCAATTAATGGAAACTCTACTT
CCATGGCTGGAGAATAAATA

Downstream 100 bases:

>100_bases
GCGTCATCAGCGCACTTGCCGACCATAACGCCGTGGTGTTACTGGATGCCGACAGCCACGCCAGTATTTATGACGCCTGT
TCTCTCGGTGGCGCGGAAAT

Product: putative class II aminotransferase

Products: NA

Alternate protein names: Serine Palmitoyltransferase; Aminotransferase Class II; Serine C-Palmitoyltransferase; Aminotransferase Class-I; 8-Amino-7-Oxononanoate Synthase-Like Protein

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNHDAISEGQAALAAQGTGTTGS
RMANGSYAPHLALEKEIAEFFNRPTAIVFQPVIPLI

Sequences:

>Translated_116_residues
MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNHDAISEGQAALAAQGTGTTGS
RMANGSYAPHLALEKEIAEFFNRPTAIVFQPVIPLI
>Mature_115_residues
GLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNHDAISEGQAALAAQGTGTTGSR
MANGSYAPHLALEKEIAEFFNRPTAIVFQPVIPLI

Specific function: Unknown

COG id: COG0156

COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12440; Mature: 12309

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNH
CCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECC
DAISEGQAALAAQGTGTTGSRMANGSYAPHLALEKEIAEFFNRPTAIVFQPVIPLI
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure 
GLYDKYARLAGERLQFSDNGLTPFGTCIDEVYSATEGRIGNKKVILAGTNNYLGLTFNH
CHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECC
DAISEGQAALAAQGTGTTGSRMANGSYAPHLALEKEIAEFFNRPTAIVFQPVIPLI
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA