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The map label for this gene is yiaO [C]

Identifier: 30064272

GI number: 30064272

Start: 3029201

End: 3029554

Strand: Direct

Name: yiaO [C]

Synonym: S3151

Alternate gene names: 30064272

Gene position: 3029201-3029554 (Clockwise)

Preceding gene: 30064271

Following gene: 30064273

Centisome position: 65.86

GC content: 42.66

Gene sequence:

>354_bases
ATGAAAATGAGGTCATTTACCCGCTCATTAGTCTGCGCATCCTTGCTGGCTCTGGTTAGCACTGGCGTAAACGCCGCAGA
AAAAGTGGCGTTAAAGTTAGCACACAACCTGGAAAGAAGTCATGTTGTACATCAGAGTTTTGAAGAGCTGGCGAAAGAGG
TAAAACAGCTGTCAAAAGGTAATATGGTGATCCGTATTTATCCCAGCAGCCAGATGGGTAATGCGCGAGAAACTATGGAA
TTGTTGCAAAATGGCGCACTGGATATGACCAAAGGTTCCGCCAGTGATCTGGAGTCTTTTGATAATATTTATGCTATCTA
TAATTTGCCGTTCTTATTAAGTTGTTTTTGGTGA

Upstream 100 bases:

>100_bases
TAGACAAGTTGTCAGACAGGTTAACCAATTTGTCGCACAAATCACTGATAAGCACAATTAGATATCAACCAATTTCCATC
CTTCAACAGGGAGTTTTTTT

Downstream 100 bases:

>100_bases
AGTTGGTAAAGAAATTATGGACTCAACAAAAGACAAAGGCTTTTTTGCTTTATCAGCTTATGTAGCGGGTACTCGCAGTT
TCTATGCGAAAAAACCGATT

Product: hypothetical protein

Products: NA

Alternate protein names: DctP Protein; TRAP Transporter Solute Receptor DctP Family; Trap Dicarboxylate Transporter Dctp Subunit; C4-Dicarboxylate Transport System; Carbon Storage Regulator; TRAP-Type C4-Dicarboxylate Transport System; TRAP Dicarboxylate Transporter Subunit DctP; Ribosomal Protein L; TRAP Transporter Solute Receptor DctP Family Protein; 50S Ribosomal Protein L

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKMRSFTRSLVCASLLALVSTGVNAAEKVALKLAHNLERSHVVHQSFEELAKEVKQLSKGNMVIRIYPSSQMGNARETME
LLQNGALDMTKGSASDLESFDNIYAIYNLPFLLSCFW

Sequences:

>Translated_117_residues
MKMRSFTRSLVCASLLALVSTGVNAAEKVALKLAHNLERSHVVHQSFEELAKEVKQLSKGNMVIRIYPSSQMGNARETME
LLQNGALDMTKGSASDLESFDNIYAIYNLPFLLSCFW
>Mature_117_residues
MKMRSFTRSLVCASLLALVSTGVNAAEKVALKLAHNLERSHVVHQSFEELAKEVKQLSKGNMVIRIYPSSQMGNARETME
LLQNGALDMTKGSASDLESFDNIYAIYNLPFLLSCFW

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13056; Mature: 13056

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRSFTRSLVCASLLALVSTGVNAAEKVALKLAHNLERSHVVHQSFEELAKEVKQLSKG
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NMVIRIYPSSQMGNARETMELLQNGALDMTKGSASDLESFDNIYAIYNLPFLLSCFW
CEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKMRSFTRSLVCASLLALVSTGVNAAEKVALKLAHNLERSHVVHQSFEELAKEVKQLSKG
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NMVIRIYPSSQMGNARETMELLQNGALDMTKGSASDLESFDNIYAIYNLPFLLSCFW
CEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA