| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yqgD
Identifier: 30064257
GI number: 30064257
Start: 3016878
End: 3017129
Strand: Reverse
Name: yqgD
Synonym: S3136
Alternate gene names: 30064257
Gene position: 3017129-3016878 (Counterclockwise)
Preceding gene: 30064266
Following gene: 30064255
Centisome position: 65.6
GC content: 43.25
Gene sequence:
>252_bases GTGGTAGCGGATCCTACCACGACTCTGCAGGTTAAAAACACTGGCAGTCTGAGTGTTAATCGGTATGGATGGATTAACAT CTGGATGGCTATTTTAGGTCAATTCTTCACCCGATTTCCACTTTTTTTTGAATCGTGTCTCATTCTGTTAAAAACGTGGC TGGAAATTTTTCCTGACAATGCCGGCATTCTGCGTATTTATCTTTTGCAATTTTCTGCCATTGTGGGGTATAAAACGCGG CGCGCGGCTTAA
Upstream 100 bases:
>100_bases ATGCCCTTCAGAGACGGACTCGGACGTAAAAAGGTGTTTTGCCATATTTAATATCACCTAAAGAGAATTTGGTTAGCTCA AACTGTTGTGTGGATTTTCT
Downstream 100 bases:
>100_bases ATAAAAAGCACACGACGTTTCTTTCGTGTTGCCACTTCCAGCCGGGTTGAAATCAGAGTTTTGGCTTGTGGGTTCGTCTT AACAGGCGGCCGTGGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MVADPTTTLQVKNTGSLSVNRYGWINIWMAILGQFFTRFPLFFESCLILLKTWLEIFPDNAGILRIYLLQFSAIVGYKTR RAA
Sequences:
>Translated_83_residues MVADPTTTLQVKNTGSLSVNRYGWINIWMAILGQFFTRFPLFFESCLILLKTWLEIFPDNAGILRIYLLQFSAIVGYKTR RAA >Mature_83_residues MVADPTTTLQVKNTGSLSVNRYGWINIWMAILGQFFTRFPLFFESCLILLKTWLEIFPDNAGILRIYLLQFSAIVGYKTR RAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020263 - ProDom: PD060540 [H]
Pfam domain/function: PF10885 DUF2684 [H]
EC number: NA
Molecular weight: Translated: 9562; Mature: 9562
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADPTTTLQVKNTGSLSVNRYGWINIWMAILGQFFTRFPLFFESCLILLKTWLEIFPDN CCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGILRIYLLQFSAIVGYKTRRAA CCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVADPTTTLQVKNTGSLSVNRYGWINIWMAILGQFFTRFPLFFESCLILLKTWLEIFPDN CCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGILRIYLLQFSAIVGYKTRRAA CCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]