| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yqgB
Identifier: 30064255
GI number: 30064255
Start: 3016399
End: 3016545
Strand: Reverse
Name: yqgB
Synonym: S3134
Alternate gene names: 30064255
Gene position: 3016545-3016399 (Counterclockwise)
Preceding gene: 30064257
Following gene: 30064254
Centisome position: 65.59
GC content: 40.82
Gene sequence:
>147_bases GTGCTTAATAATGTTATGAAAAAGAAACCGGTTGCGCAGTCGGAGCGTCAGCATACACTGCTGGAAAATCCATGTGCTTA TGGGTTGTTATCGCAGTTCCAGGCTGCGACAGTCGTTAACTGTTTTACACTTAATAAAATAATTTGA
Upstream 100 bases:
>100_bases AAGAGCTGGTTACAGTTACTGAGGACTGAACAAGGGCGCTCTTGTAAAAACAAGAGTTTTCTCGTGGTTTCGCCGAACTG TCACACTTACGTTCGGTTAT
Downstream 100 bases:
>100_bases GGTTCGCTATGTCTGACGACATGTCTATGGGTTTGCCTTCGTCAGCGGGCGAACACGGTGTACTACGCTCCATGCAGGAG GTTGCAATGAGCTCCCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MLNNVMKKKPVAQSERQHTLLENPCAYGLLSQFQAATVVNCFTLNKII
Sequences:
>Translated_48_residues MLNNVMKKKPVAQSERQHTLLENPCAYGLLSQFQAATVVNCFTLNKII >Mature_48_residues MLNNVMKKKPVAQSERQHTLLENPCAYGLLSQFQAATVVNCFTLNKII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yqgB family [H]
Homologues:
Organism=Escherichia coli, GI145693178, Length=43, Percent_Identity=93.0232558139535, Blast_Score=86, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020196 - ProDom: PD050163 [H]
Pfam domain/function: PF11036 YqgB [H]
EC number: NA
Molecular weight: Translated: 5406; Mature: 5406
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNNVMKKKPVAQSERQHTLLENPCAYGLLSQFQAATVVNCFTLNKII CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNNVMKKKPVAQSERQHTLLENPCAYGLLSQFQAATVVNCFTLNKII CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]