Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is cysC
Identifier: 30064107
GI number: 30064107
Start: 2840228
End: 2840833
Strand: Reverse
Name: cysC
Synonym: S2966
Alternate gene names: 30064107
Gene position: 2840833-2840228 (Counterclockwise)
Preceding gene: 30064108
Following gene: 30064106
Centisome position: 61.77
GC content: 51.65
Gene sequence:
>606_bases ATGGCGCTGCATGACGAAAACGTCGTCTGGCATAGTCATCCGGTCACTGTGCAACAACGCGAACTACACCACGGTCATCG TGGTGTAGTGCTGTGGTTTACCGGCCTCTCCGGGTCCGGTAAATCAACGGTCGCCGGGGCGCTGGAGGAGGCGTTACATA AACTCAGCGTCAGTACGTATCTGCTGGATGGCGACAATGTTCGCCACGGATTATGCAGCGATCTCGGTTTTAGCGATGCC GATCGTAAAGAGAATATCCGTCGCGTCGGTGAAGTGGCGAATTTGATGGTTGAAGCCGGACTGGTGGTGCTGACCGCATT TATCTCGCCACACCGCGCCGAACGCCAGATGGTTCGCGAACGCGTAGGAGAAGGGCGCTTTATTGAAGTGTTTGTCGATA CGCCGCTGGCGATTTGCGAAGCCCGCGATCCAAAAGGCTTATATAAGAAAGCGCGTGCCGGTGAACTGCGCAACTTTACG GGAATAGATTCCGTTTACGAAGCGCCTGAATCGGCAGAAATTCATCTCAATGGTGAACAATTAGTAACAAATTTGGTACA GCAATTATTAGATCTGTTGAGACAGAACGATATTATCAGATCCTGA
Upstream 100 bases:
>100_bases CTGCGTCATCTGAATTCAGTGCATTCGAACTGGAATTGAATGCCCTGGTTCGTCGCCACTTTCCGCACTGGGGCGCGCGC GATTTGCTGGGGGATAAATA
Downstream 100 bases:
>100_bases GACACCACCGGGTTTCCATGCCCGGTTCGTCAAAGTAACAGGATCAAATATGCGTAATAGCCATAACATTACACTAACAA ATAACGACAGCCTTACTGAG
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLSVSTYLLDGDNVRHGLCSDLGFSDA DRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
Sequences:
>Translated_201_residues MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLSVSTYLLDGDNVRHGLCSDLGFSDA DRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS >Mature_200_residues ALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLSVSTYLLDGDNVRHGLCSDLGFSDAD RKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTG IDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=201, Percent_Identity=50.7462686567164, Blast_Score=194, Evalue=3e-50, Organism=Homo sapiens, GI34447231, Length=201, Percent_Identity=50.2487562189055, Blast_Score=191, Evalue=3e-49, Organism=Homo sapiens, GI62912492, Length=201, Percent_Identity=50.2487562189055, Blast_Score=191, Evalue=3e-49, Organism=Escherichia coli, GI1789107, Length=201, Percent_Identity=99.5024875621891, Blast_Score=409, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17542422, Length=201, Percent_Identity=50.7462686567164, Blast_Score=202, Evalue=1e-52, Organism=Saccharomyces cerevisiae, GI6322852, Length=197, Percent_Identity=47.7157360406091, Blast_Score=189, Evalue=2e-49, Organism=Drosophila melanogaster, GI24667040, Length=200, Percent_Identity=47, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI24667032, Length=200, Percent_Identity=47, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI24667028, Length=200, Percent_Identity=47, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI24667036, Length=200, Percent_Identity=47, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI116007838, Length=200, Percent_Identity=47, Blast_Score=173, Evalue=5e-44, Organism=Drosophila melanogaster, GI24667044, Length=200, Percent_Identity=47, Blast_Score=173, Evalue=5e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 22352; Mature: 22220
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLSVSTY CCCCCCCEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHE LLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRE EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQ HHCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECHHH LVTNLVQQLLDLLRQNDIIRS HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLSVSTY CCCCCCEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHE LLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRE EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH RVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQ HHCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECHHH LVTNLVQQLLDLLRQNDIIRS HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA