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The map label for this gene is hypF

Identifier: 30064071

GI number: 30064071

Start: 2803481

End: 2805733

Strand: Reverse

Name: hypF

Synonym: S2926

Alternate gene names: 30064071

Gene position: 2805733-2803481 (Counterclockwise)

Preceding gene: 30064072

Following gene: 161486446

Centisome position: 61.0

GC content: 57.57

Gene sequence:

>2253_bases
ATGGCAAAAAACACATCTTGCGGTGTCCAACTGCGTATTCGTGGCAAAGTGCAGGGCGTCGGTTTTCGTCCGTTTGTCTG
GCAGCTGGCACAGCAATTAAATCTTCACGGCGATGTATGTAATGACGGCGATGGCGTAGAAGTCCGGCTGCTGGAAGACC
CGGAAACGTTTCTTGTTCAATTGCATCAGCACTGTCCGCCACTGGCGCGTATTGATAGCGTCGAGCGTGAGCCGTTTATC
TGGTCACAACTGCCCACCGAGTTCACCATCCGCCAGAGCACCGGCGGCACCATGAATACGCAAATTGTCCCGGATGCCGC
CACTTGCCCTGCTTGCCTTGCCGAAATGAATACCCCAGGCGAGCGGCGTTATCGTTATCCGTTTATCAACTGTACCCACT
GCGGCCCGCGTTTCACCATTATTCGCGCGATGCCTTACGACCGCCCGTTTACCGTGATGGCGGCGTTTCCGCTATGTCCG
GCCTGTGACAAAGAGTACCGCGACCCGCTCGATCGTCGCTTCCACGCCCAGCCGGTGGCCTGCCCGGAGTGTGGCCCGCA
TCTTGAATGGGTAAGTCATGGTGAACATGCAGAACAAGAGGCGGCATTACAGGCAGCTATCGCACAGTTAAAAATGGGCA
ACATTGTCGCCATCAAAGGGATTGGCGGATTTCATCTTGCCTGCGATGCACGTAACAGTAACGCGGTGGCGACACTGCGG
GAGCGCAAACATCGCCCGGCGAAACCGCTGGCAGTCATGTTGCCAGTGGCAGAAAGTTTACCAGACGCTGCGCGCCAGTT
GCTTACCACGCCCGCTGCGCCGATTGTGCTGGTGGATAAAAAATACGTACCTGAGCTTTGTGATGATATCGCCCCTGGCC
TTAACGAAGTCGGGGTGATGTTGCCTGCGAACCCGCTCCAGCATTTGCTGTTACAGGAACTGCAATGCCCGCTGGTGATG
ACCTCCGGCAACCTGAGCGGTAAACCACCAGCTATCAGCAACGAACAGGCGCTGGCGGATTTGCAGGGCATTGCCGACGG
ATTCTTGCTACATAACCGCGACATCGTGCAGCGGATGGATGATTCAGTGGTGCGCGAAAGCGGCGAAATGCTGCGCCGTT
CGCGGGGGTATGTGCCGGATGCGCTGGTTTTGCCTCCGGGCTTTAAAAATGTTCCGCCTGTGCTGTGTCTTGGCGCGGAT
CTGAAAAATACCTTCTGCCTGGTGCGCGGTGAACAAGCGGTGTTGAGTCAGCATCTGGGCGATTTAAGTGACGATGGCAT
CCAGATGCAGTGGCGCGAAGCGTTACGCCTGATGCAAAACATCTACGATTTCACTCCGCAATACATTGTGCATGATGTGC
ATCCGGGCTATGTCTCCAGCCAGTGGGCGAGCGAAATGAATCTGCCGACGCAAACGGTACTGCATCATCATGCCCATGCA
GCGGCGTGTCTGGCAGAGCATCAGTGGCCGCTGGATGGCGGTGATGTCATTGCTTTGACGCTCGACGGTATCGGTATGGG
GGAGAATGGCGCTTTGTGGGGCGGCGAGTGCCTGCGGGTGAACTATCGCGAATGTGAGCACCTGGGCGGCTTGCCTGCAG
TGGCGCTTCCGGGTGGCGATTTGGCGGCGAAGCAGCCGTGGCGAAACCTGCTGGCGCAGTGCCTGCGCTTTGTGCCGGAG
TGGCAGAATTACCCTGAAACGGCAAGTGTGCAACAGCAAAACTGGAGCGTACTGGCGCGGGCCATTGAGCGTGGAATTAA
CGCGCCGCTGGCATCATCGTGTGGGCGGTTGTTCGATGCAGTGGCGGCGGCACTGGGCTGTGCGCCAGCCACGTTAAGTT
ATGAAGGTGAAGCGGCTTGTGCTCTGGAGGCGCTCGCAGCCTCATGCGACGGAGTGACGCATCCGGTGACGATGCCGCGG
GTGGACAATCAACTGGATCTCGCCACTTTCTGGCAGCAGTGGCTGAACTGGCAGGCACTGGTTAATCAACGCGCGTGGGC
GTTTCATGATGCGCTGGCGCAGGGTTTTGCCGCGTTGATGCGTGAGCAGGCCACGATGCGTGGTATCACTACGCTGGTAT
TTAGCGGCGGGGTTATTCATAACCGTTTGCTGCGTGCACGTCTGGCGCATTATCTCGCTGATTTCACATTGCTCTTTCCA
CAGAGTTTACCGGCGGGTGATGGCGGTTTGTCTCTGGGGCAGGGGGTTATTGCTGCGGCGCGTTGGTTAGCGGGTGAAGT
CCAGAACGGATAA

Upstream 100 bases:

>100_bases
AATACGGAGCGGGCGGTATCGCCGACCTGAGACTGCCGGATACGACGCTGTCGTGTCCGGCAGGGCGGGTTACGCAATTC
ATGATGGCGGGAATAACTCA

Downstream 100 bases:

>100_bases
AGCGTGTTGCATTTGGACACCCTTGCCGGATGCGGCGTAAATGCCTTATCCGGCCTACACATGCGTCCCCGTAGGTCGGA
TAAGACGCGCCAGCGTCGCA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: Carbamoyl phosphate-converting enzyme hypF; [NiFe]-hydrogenase maturation factor hypF; Hydrogenase maturation protein hypF [H]

Number of amino acids: Translated: 750; Mature: 749

Protein sequence:

>750_residues
MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQLHQHCPPLARIDSVEREPFI
WSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLR
ERKHRPAKPLAVMLPVAESLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPGLNEVGVMLPANPLQHLLLQELQCPLVM
TSGNLSGKPPAISNEQALADLQGIADGFLLHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALVLPPGFKNVPPVLCLGAD
LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYIVHDVHPGYVSSQWASEMNLPTQTVLHHHAHA
AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE
WQNYPETASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEALAASCDGVTHPVTMPR
VDNQLDLATFWQQWLNWQALVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP
QSLPAGDGGLSLGQGVIAAARWLAGEVQNG

Sequences:

>Translated_750_residues
MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQLHQHCPPLARIDSVEREPFI
WSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLR
ERKHRPAKPLAVMLPVAESLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPGLNEVGVMLPANPLQHLLLQELQCPLVM
TSGNLSGKPPAISNEQALADLQGIADGFLLHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALVLPPGFKNVPPVLCLGAD
LKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYIVHDVHPGYVSSQWASEMNLPTQTVLHHHAHA
AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPE
WQNYPETASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEALAASCDGVTHPVTMPR
VDNQLDLATFWQQWLNWQALVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP
QSLPAGDGGLSLGQGVIAAARWLAGEVQNG
>Mature_749_residues
AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQLHQHCPPLARIDSVEREPFIW
SQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPA
CDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLRE
RKHRPAKPLAVMLPVAESLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPGLNEVGVMLPANPLQHLLLQELQCPLVMT
SGNLSGKPPAISNEQALADLQGIADGFLLHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALVLPPGFKNVPPVLCLGADL
KNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPQYIVHDVHPGYVSSQWASEMNLPTQTVLHHHAHAA
ACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEW
QNYPETASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEALAASCDGVTHPVTMPRV
DNQLDLATFWQQWLNWQALVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQ
SLPAGDGGLSLGQGVIAAARWLAGEVQNG

Specific function: Along with hypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carb

COG id: COG0068

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI2367152, Length=750, Percent_Identity=97.8666666666667, Blast_Score=1416, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001792
- InterPro:   IPR017968
- InterPro:   IPR004421
- InterPro:   IPR017945
- InterPro:   IPR006070
- InterPro:   IPR011125 [H]

Pfam domain/function: PF00708 Acylphosphatase; PF01300 Sua5_yciO_yrdC; PF07503 zf-HYPF [H]

EC number: NA

Molecular weight: Translated: 81999; Mature: 81868

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00150 ACYLPHOSPHATASE_1 ; PS51160 ACYLPHOSPHATASE_3 ; PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQ
CCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH
LHQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG
HHHHCCCHHHHCCCCCCCEEHHCCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCC
ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA
CCEEECCEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHCCHHHHHHCCCCCC
CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLR
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHH
ERKHRPAKPLAVMLPVAESLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPGLNEVGVM
HHCCCCCCCEEEEECCHHCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHCCEE
LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLLHNRDIVQRMD
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
DSVVRESGEMLRRSRGYVPDALVLPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHCC
DLSDDGIQMQWREALRLMQNIYDFTPQYIVHDVHPGYVSSQWASEMNLPTQTVLHHHAHA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHH
AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD
HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCEEEECHHHHHHCCCCCEEEECCCC
LAAKQPWRNLLAQCLRFVPEWQNYPETASVQQQNWSVLARAIERGINAPLASSCGRLFDA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VAAALGCAPATLSYEGEAACALEALAASCDGVTHPVTMPRVDNQLDLATFWQQWLNWQAL
HHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
QSLPAGDGGLSLGQGVIAAARWLAGEVQNG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLLEDPETFLVQ
CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHH
LHQHCPPLARIDSVEREPFIWSQLPTEFTIRQSTGGTMNTQIVPDAATCPACLAEMNTPG
HHHHCCCHHHHCCCCCCCEEHHCCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHCCCCC
ERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCPACDKEYRDPLDRRFHAQPVA
CCEEECCEEEECCCCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHCCHHHHHHCCCCCC
CPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAIKGIGGFHLACDARNSNAVATLR
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCHHHHHH
ERKHRPAKPLAVMLPVAESLPDAARQLLTTPAAPIVLVDKKYVPELCDDIAPGLNEVGVM
HHCCCCCCCEEEEECCHHCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHCCEE
LPANPLQHLLLQELQCPLVMTSGNLSGKPPAISNEQALADLQGIADGFLLHNRDIVQRMD
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
DSVVRESGEMLRRSRGYVPDALVLPPGFKNVPPVLCLGADLKNTFCLVRGEQAVLSQHLG
HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHCC
DLSDDGIQMQWREALRLMQNIYDFTPQYIVHDVHPGYVSSQWASEMNLPTQTVLHHHAHA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCHHHHHHHHHHH
AACLAEHQWPLDGGDVIALTLDGIGMGENGALWGGECLRVNYRECEHLGGLPAVALPGGD
HHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEECCCEEEECHHHHHHCCCCCEEEECCCC
LAAKQPWRNLLAQCLRFVPEWQNYPETASVQQQNWSVLARAIERGINAPLASSCGRLFDA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VAAALGCAPATLSYEGEAACALEALAASCDGVTHPVTMPRVDNQLDLATFWQQWLNWQAL
HHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
QSLPAGDGGLSLGQGVIAAARWLAGEVQNG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 8661925; 12206761 [H]