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The map label for this gene is smpA

Identifier: 30064015

GI number: 30064015

Start: 2746967

End: 2747119

Strand: Direct

Name: smpA

Synonym: S2854

Alternate gene names: 30064015

Gene position: 2746967-2747119 (Clockwise)

Preceding gene: 30064014

Following gene: 30064018

Centisome position: 59.73

GC content: 47.06

Gene sequence:

>153_bases
ATGTCCGATCCATTTGGTACGAATACCTGGTTCTATGTCTTCCGCCAGCAACCAGGTCATGAAGGTGTAACGCAGCAAAC
GCTGACGCTGACCTTTAACAGTAGCGGTGTGTTGACCAATATTGATAACAAACCTGCGCTGAGTGGTAACTAA

Upstream 100 bases:

>100_bases
TGACATCAACCAGGGGAACTATCTGACCGCTAACGACGTATCCAAAATACGTGTTGGCATGACGCAACAACAAGTTGCGT
ACGCATTGGGTACACCGCTG

Downstream 100 bases:

>100_bases
TAATAAAGTTGCTCTCAAAGACGTTAAAAAAGGTGCTCAATGAGCACCTTTTTTCTGTCTGTTATTTATTCGCTGATTTT
TCTGCTCGTTGCCTGCGAAG

Product: small membrane protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 50; Mature: 49

Protein sequence:

>50_residues
MSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN

Sequences:

>Translated_50_residues
MSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN
>Mature_49_residues
SDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family

Homologues:

Organism=Escherichia coli, GI87082138, Length=50, Percent_Identity=100, Blast_Score=108, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMPA_ECOL6 (P0A938)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_755021.1
- ProteinModelPortal:   P0A938
- SMR:   P0A938
- EnsemblBacteria:   EBESCT00000045154
- GeneID:   1038872
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c3139
- GeneTree:   EBGT00050000011028
- HOGENOM:   HBG700645
- OMA:   NTWYYIY
- ProtClustDB:   PRK11548
- InterPro:   IPR007450

Pfam domain/function: PF04355 SmpA_OmlA

EC number: NA

Molecular weight: Translated: 5518; Mature: 5387

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS51257 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN
CCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN
CCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157