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The map label for this gene is yohC

Identifier: 30063582

GI number: 30063582

Start: 2227303

End: 2227890

Strand: Reverse

Name: yohC

Synonym: S2349

Alternate gene names: 30063582

Gene position: 2227890-2227303 (Counterclockwise)

Preceding gene: 30063584

Following gene: 161486468

Centisome position: 48.44

GC content: 53.57

Gene sequence:

>588_bases
ATGAGCCATGTCTGGGGACTGTTTTCCCATCCCGATCGTAAAATGCAGGTGATTAATCGCGAAAACGAAACGATTTCTCA
CCATTACACCCACCACGTTTTGCTGATGGCGGCGATTCCGGTGATTTGCGCCTTCATTGGCACTACACAGATTGGCTGGA
ATTTTGGCGATGGCACTATCCTGAAGTTATCCTGGTTTACCGGACTGGCGCTGGCTGTCTTGTTTTACGGCGTTATGCTG
GCTGGGGTTGCGGTGATGGGGCGGGTCATCTGGTGGATGGCGCGCAATTACCCGCAGCGTCCGTCTCTTGCGCACTGCAT
GGTCTTCGCGGGCTACGTTGCAACTCCGCTGTTTTTAAGCGGTCTGGTGGCGCTTTATCCACTGGTCTGGTTGTGTGCGC
TGGTCGGCACGGTGGCGCTGTTTTACACCGGCTACCTGCTTTACCTTGGTATTCCGAGCTTCCTGAATATCAACAAAGAG
GAAGGCCTTAGCTTCTCCAGTTCGACGCTGGCGATTGGCGTGCTGGTACTGGAAGTGCTGCTCACCCTAACCGTTATACT
ATGGGGCTACGGTTATCGTTTGTTCTAG

Upstream 100 bases:

>100_bases
ATACATCAGACGGTGCAAATTACATGGATGAACAAAAAATAATCACAAGCTGGCTTATACTTGAACTGTCAGGTTCATGA
ACTCACAACAAGGGGGCGGT

Downstream 100 bases:

>100_bases
AAAGTTCTTTGACGTTGCATTGCTGGCGTAAATGTCAGCAATGCAGCATTTACTCACGATTCTCCTTTGACGATCGCACT
TTTTGCTCGTTATGATGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSHVWGLFSHPDRKMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVML
AGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
EGLSFSSSTLAIGVLVLEVLLTLTVILWGYGYRLF

Sequences:

>Translated_195_residues
MSHVWGLFSHPDRKMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVML
AGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
EGLSFSSSTLAIGVLVLEVLLTLTVILWGYGYRLF
>Mature_194_residues
SHVWGLFSHPDRKMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLA
GVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEE
GLSFSSSTLAIGVLVLEVLLTLTVILWGYGYRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082055, Length=195, Percent_Identity=98.974358974359, Blast_Score=389, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006977 [H]

Pfam domain/function: PF04893 Yip1 [H]

EC number: NA

Molecular weight: Translated: 21720; Mature: 21589

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVWGLFSHPDRKMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTI
CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEE
LKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHH
LTLTVILWGYGYRLF
HHHHHHHHHCCHHCC
>Mature Secondary Structure 
SHVWGLFSHPDRKMQVINRENETISHHYTHHVLLMAAIPVICAFIGTTQIGWNFGDGTI
CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEE
LKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPSLAHCMVFAGYVATPLFLS
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKEEGLSFSSSTLAIGVLVLEVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHCCCCCHHHHHHHHHHHHHH
LTLTVILWGYGYRLF
HHHHHHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]