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The map label for this gene is yehD

Identifier: 30063546

GI number: 30063546

Start: 2178734

End: 2179258

Strand: Reverse

Name: yehD

Synonym: S2298

Alternate gene names: 30063546

Gene position: 2179258-2178734 (Counterclockwise)

Preceding gene: 30063547

Following gene: 30063545

Centisome position: 47.38

GC content: 40.57

Gene sequence:

>525_bases
ATGAAACGTTCAATTATTGCTGCCGCTGTCTTTTCTTCTTTTTTTATGAGCGCTGGAGTATTTGCTGCAGACGTTGATAC
CGGAACATTAACCATTAAAGGAAATATTGCAGAATCTCCGTGTAAATTCGAAGCGGGTGGTGATTCAGTAAGTATTAATA
TGCCGACTGTACCAACCACTGTCTTTGAAGGTAAAGCTAAATATTCTACCTATGATGATGCAGTCGGTGTAACCAGCAGC
ATGTTAAAAATTAGCTGCCCGAAAGAAGTTGCTGGTGTAAAACTCTCGTTGATCACAAACGACAAAATAACCGGTAACGA
TAAGGCGATAGCCAGTAGCAACGATACCGTAGGTGATAACAGCGATGTCCTAGATGTTTCTGCACCTTTTAACATTGAGA
GTTATAAAACAGCGGAAGGTCAATATGCTATTCCGTTTAAAGCAAAATACCTGAAACTGACAGATAACTCAGTGCAATCA
GGTGATGTGTTATCTTCTCTGGTTATGCGTGTGGCGCAGGATTAA

Upstream 100 bases:

>100_bases
AATATGTTTACATTGCGGCAGCTTTTTTGATGTGAGAAATTTGTTTCCAAGAGATACAGACTCTTAACAACCAAAAATAA
ATTTTATTAAGGAACATATT

Downstream 100 bases:

>100_bases
TAAATAAAATTGCAAGTTTCTCCAGGTAATAAACATGGCCGCTATCCCCATGGCGGCTTTTTAATTTAAGAGGCATTAAG
ATGAAAGGATTATTATCTTT

Product: putative fimbrial-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTTVFEGKAKYSTYDDAVGVTSS
MLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQS
GDVLSSLVMRVAQD

Sequences:

>Translated_174_residues
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTTVFEGKAKYSTYDDAVGVTSS
MLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQS
GDVLSSLVMRVAQD
>Mature_174_residues
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTTVFEGKAKYSTYDDAVGVTSS
MLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQS
GDVLSSLVMRVAQD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788429, Length=180, Percent_Identity=96.1111111111111, Blast_Score=340, Evalue=3e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18302; Mature: 18302

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTT
CCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCEEECCCCEEEEECCCCCCE
VFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGDN
EECCCCCCCCCCCCCCCCCCEEEEECCCHHCCEEEEEEECCEECCCCCEEECCCCCCCCC
SDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
CCEEEECCCCCCCCEECCCCCEECCEEEEEEEEECCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFEAGGDSVSINMPTVPTT
CCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCEEECCCCEEEEECCCCCCE
VFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDKITGNDKAIASSNDTVGDN
EECCCCCCCCCCCCCCCCCCEEEEECCCHHCCEEEEEEECCEECCCCCEEECCCCCCCCC
SDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLTDNSVQSGDVLSSLVMRVAQD
CCEEEECCCCCCCCEECCCCCEECCEEEEEEEEECCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]