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The map label for this gene is yehB

Identifier: 30063545

GI number: 30063545

Start: 2175483

End: 2177963

Strand: Reverse

Name: yehB

Synonym: S2296

Alternate gene names: 30063545

Gene position: 2177963-2175483 (Counterclockwise)

Preceding gene: 30063546

Following gene: 30063544

Centisome position: 47.35

GC content: 45.55

Gene sequence:

>2481_bases
ATGTTGAGAATGACCCCACTTGCATCAGCAATCGTAGCGTTATTGCTCGGCATTGAAGCTTATGCAGCTGAAGAAACCTT
TGATACCCATTTTATGATAGGTGGAATGAAAGACCAGCAGGTTGCAAATATTCGTCTTGATGATAATCAACCCTTACCGG
GGCAGTATGACATCGATATTTATGTCAATAAGCAATGGCGCGGGAAATATGAGATTATTGTTAAAGACAACCCGCAAGAA
ACATGTTTATCAAGAGAAGTTATCAAGCGGTTAGGCATTAATAGCGATAACTTCGCCAGCGGTAAGCAATGTTTAACATT
TGAGCAACTTGTTCAGGGTGGGAGCTATAGCTGGGATATCGGGGTTTTTCGTCTCGATTTCAGTGTCCCGCAGGCTTGGG
TGGAAGAACTGGAAAGTGGCTATGTTCCACCGGAAAACTGGGAGCGGGGTATTAATGCGTTTTATACTTCTTATTATGTG
AGTCAGTATTACAGCGACTATAAAGCGTCGGGTAACAACAAGAGTACATATGTACGTTTTAACAGCGGGTTAAATTTACT
GGAGTGGCAACTGCATTCTGATGCCAGTTTCAGTAAAACAAATAACAATCCAGGGGTGTGGAAAAGCAATACCCTGTATC
TGGAACGTGGATTTGCCCAATTTCTCGGCACGCTTCGCGTGGGTGATATGTACACATCAAGCGATATTTTTGATTCTGTT
CGCTTCAGCGGTGTGCGGTTGTTTCGTGATATGCAGATGTTGCCTAACTCGAAACAAAATTTTACGCCACGGGTGCAGGG
GATTGCTCAGAGTAACGCGCTGGTAACTATTGAACAGAATGGTTTTGTGGTTTATCAGAAAGAGGTTCCTCCTGGCCCGT
TTGCGATTACAGATTTGCAGTTGGCCGGTGGTGGAGCAGATCTTGATGTTAGCGTGAAAGAGGCGGACGGCTCGGTAACC
ACCTATCTGGTGCCTTATGCAGCGGTGCCAAATATGCTGCAACCCGGCGTGTCGAAATATGATTTTGCGGCGGGCCGTAG
CCATATTGAAGGGGCGAGCAAGCAAAGTGATTTTGTCCAGGCAGGTTATCAGTATGGTTTTAATAACTTATTGACGCTGT
ATGGCGGCACGATGGTTGCTAATAATTACTATGCGTTTACCCTCGGAACGGGTTGGAACACGCGCATTGGCGCAATTTCC
GTCGATGCCACGAAGTCGCATAGTAAACAAGACAACGGCGATGTGTTTGACGGGCAAAGTTATCAAATTGCCTACAACAA
ATTTGTGAGCCAAACGTCGACGCGTTTTGGTCTGGCGGCCTGGCGTTATTCGTCGCGTGATTACCGGACATTTAACGATC
ACGTTTGGGCAAACAATAAAGATAATTATCGCCGTGATGAAAACGATATCTATGACATTGCCGATTATTACCAGAACGAT
TTTGGCCGTAAAAATAGCTTTTCTGCCAATATGAGCCAGTCATTGCCAGAAGGCTGGGGTTCTGTGTCCTTAAGTACGTT
ATGGCGAGATTACTGGGGGCGTAGCGGCAGCAGTAAGGATTATCAGTTGAGTTATTCCAATAACTGGCGGCGGATAAGCT
ATACCCTCGCGGCAAGCCAGGCGTATGGCGAGAATCATCATGAAGAGAAACGTTTTAATATTTTTATATCAATTCCCTGT
GATTGGGGTGATGACGTTACGACGCCTCGTCGGCAAATATATATGTCTAACTCAACGACGTTTGATGATCAGGGTTTTGC
CTCAAATAATACGGGATTATCAGGAACAGTAGGGAGTCGGGATCAGTTCAATTATGGTGTCAACCTGAGTCATCAACATC
AGGGAAATGAAACGACAGCTGGGGCGAATTTGACCTGGAACGCGCCGGTTGCGACAGTGAATGGCAGTTATAGTCAGTCG
AGTACTTATCGACAGACTGGAGCCAGTGTTTCAGGGGGCATTGTCGCCTGGTCGGGTGGCGTTAATCTGGCGAACCGTCT
TTCCGAAACGTTTGCTGTGATGAATGCGCCAGGAATTAAAGATGCTTATGTCAATGGGCAAAAATATCGCACAACAAACC
GTAATGGAGTGGTGGTATACGACGGAATGACACCTTATCGGGAAAATCACCTGATGCTGGATGTGTCGCAAAGCGATAGC
GAAGCAGAATTACGTGGCAACCGGAAAATTGCCGCCCCTTATCGCGGCGCGGTTGTACTGGTTAATTTTGATACCGATCA
GCGCAAGCCCTGGTTTATAAAAGCGTTAAGAGCGGATGGTCAACCATTAACGTTTGGTTATGAAGTCAATGATATCCATG
GTCATAATATTGGCGTTGTCGGCCAGGGAAGCCAGTTATTTATTCGCACCAATGAAATACCGCCATCGGTTAATGTAGCA
ATTGATAAGCAACAAGGACTTTCATGCACAATCACCTTCGGTAAAGAGATTGATGAAAGTAGAAATTATATTTGCCAGTA
A

Upstream 100 bases:

>100_bases
TGTTAATATCAAAAGTAATAATGCAAATAACTGGTATCTGACCATTATCAATGACCACGGCAACTATATTAGTGACAAAA
TTTAATTGCAGGAGCTGCCT

Downstream 100 bases:

>100_bases
TAGTCAGGTGGTTCTATGGAAATTCGCATAATGCTATTTATATTAATGATGATGGTTATGCCTGTGAGCTATGCGGCATG
TTATAGTGAGTTATCTGTTC

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 826; Mature: 826

Protein sequence:

>826_residues
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
SQYYSDYKASGNNKSTYVRFNSGLNLLEWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQFLGTLRVGDMYTSSDIFDSV
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYGENHHEEKRFNIFISIPC
DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQS
STYRQTGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEIPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ

Sequences:

>Translated_826_residues
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
SQYYSDYKASGNNKSTYVRFNSGLNLLEWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQFLGTLRVGDMYTSSDIFDSV
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYGENHHEEKRFNIFISIPC
DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQS
STYRQTGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEIPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ
>Mature_826_residues
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQE
TCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYSWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYV
SQYYSDYKASGNNKSTYVRFNSGLNLLEWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQFLGTLRVGDMYTSSDIFDSV
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVT
TYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQAGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAIS
VDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQND
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYGENHHEEKRFNIFISIPC
DWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQS
STYRQTGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLTFGYEVNDIHGHNIGVVGQGSQLFIRTNEIPPSVNVA
IDKQQGLSCTITFGKEIDESRNYICQ

Specific function: Involved in the export and assembly of a fimbrial subunit across the outer membrane [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1788427, Length=826, Percent_Identity=97.9418886198547, Blast_Score=1680, Evalue=0.0,
Organism=Escherichia coli, GI1786332, Length=842, Percent_Identity=32.0665083135392, Blast_Score=400, Evalue=1e-112,
Organism=Escherichia coli, GI1790772, Length=858, Percent_Identity=29.2540792540793, Blast_Score=357, Evalue=1e-99,
Organism=Escherichia coli, GI1787172, Length=774, Percent_Identity=31.7829457364341, Blast_Score=346, Evalue=3e-96,
Organism=Escherichia coli, GI1786744, Length=827, Percent_Identity=29.9879081015719, Blast_Score=320, Evalue=2e-88,
Organism=Escherichia coli, GI1789533, Length=790, Percent_Identity=27.3417721518987, Blast_Score=293, Evalue=3e-80,
Organism=Escherichia coli, GI87081778, Length=570, Percent_Identity=27.719298245614, Blast_Score=196, Evalue=7e-51,
Organism=Escherichia coli, GI1789610, Length=838, Percent_Identity=24.1050119331742, Blast_Score=126, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 92409; Mature: 92409

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE
YVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYSWDI
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCCEEEE
GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYVSQYYSDYKASGNNKSTYVRF
EEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NSGLNLLEWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQFLGTLRVGDMYTSSDIFDSV
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHEEECCEECCHHHHHHH
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ
HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEE
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ
EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCCHHHHCCCHHHCCCCCCHHHHH
AGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS
HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC
YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQND
EEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQ
CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEHH
AYGENHHEEKRFNIFISIPCDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSR
HCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQTGASVSGGIVAWSGG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHCCCCCCCCEEEEECC
VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
CHHHHHHHHHHHHHCCCCCCHHEECCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLTFGYEVNDIHGHNIGVV
CHHHCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCEEEEE
GQGSQLFIRTNEIPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANIRLDDNQPLPGQYDIDI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEEE
YVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGKQCLTFEQLVQGGSYSWDI
EECCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHCCCCCEEEE
GVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYVSQYYSDYKASGNNKSTYVRF
EEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
NSGLNLLEWQLHSDASFSKTNNNPGVWKSNTLYLERGFAQFLGTLRVGDMYTSSDIFDSV
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHEEECCEECCHHHHHHH
RFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQ
HHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEECCCEEEEECCCCCCCEEEEEEE
LAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQPGVSKYDFAAGRSHIEGASKQSDFVQ
EECCCCCEEEEEEECCCCEEEEEEEHHHCCHHHCCCCCCHHHHCCCHHHCCCCCCHHHHH
AGYQYGFNNLLTLYGGTMVANNYYAFTLGTGWNTRIGAISVDATKSHSKQDNGDVFDGQS
HHHHHCCCCEEEEECCEEEECCEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEECCCC
YQIAYNKFVSQTSTRFGLAAWRYSSRDYRTFNDHVWANNKDNYRRDENDIYDIADYYQND
EEEHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH
FGRKNSFSANMSQSLPEGWGSVSLSTLWRDYWGRSGSSKDYQLSYSNNWRRISYTLAASQ
CCCCCCCCCCHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEEEEHH
AYGENHHEEKRFNIFISIPCDWGDDVTTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSR
HCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
DQFNYGVNLSHQHQGNETTAGANLTWNAPVATVNGSYSQSSTYRQTGASVSGGIVAWSGG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCHHHHCCCCCCCCEEEEECC
VNLANRLSETFAVMNAPGIKDAYVNGQKYRTTNRNGVVVYDGMTPYRENHLMLDVSQSDS
CHHHHHHHHHHHHHCCCCCCHHEECCCEEEECCCCCEEEECCCCCCCCCEEEEEECCCCC
EAELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIKALRADGQPLTFGYEVNDIHGHNIGVV
CHHHCCCCEEECCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCEEEEE
GQGSQLFIRTNEIPPSVNVAIDKQQGLSCTITFGKEIDESRNYICQ
ECCCEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097040 [H]