Click here to switch to the map view.

The map label for this gene is rfbJ

Identifier: 30063483

GI number: 30063483

Start: 2092997

End: 2093386

Strand: Reverse

Name: rfbJ

Synonym: S2217

Alternate gene names: 30063483

Gene position: 2093386-2092997 (Counterclockwise)

Preceding gene: 30063484

Following gene: 30063482

Centisome position: 45.51

GC content: 36.92

Gene sequence:

>390_bases
ATGTATCACTCTTTTAATATCGCTGTAATTATTCCTTGTTATAATGAGCAGAAGGCAATAGCAAAAGTCATAAATGATTT
CAAAACGAATATTCCAACTGCTTCTATATATGTATTTGATAATAATTCGACTGACAGTACAGCACAAGTGGCAGAGGATG
CTGGAGCAACAGTTCACTCTGTTCCTCTGAAAGGCAAGGGGAATGTCGTAAGACGTATGTTCTCAGATGTAGATGCGGAT
ATTTATCTAATGGTTGATGGAGATGACACTTATGATGCAAGTTCTGCTCCAGAAATGATTAACCATCTCATAAAAAATCA
ATTGGATATGGTTGTAGGATGTCGTCAAGAGAATGGAGATCAAAATACATACAGAAAAGGGCATCGCTGA

Upstream 100 bases:

>100_bases
TAGGATATTGCGCATCAAAATATTTCATTTTTCGTTAGTAAACGATTTGTTAAAAACACAATTACTTGCACATTAGCTAA
ATAGTTTATATGAGGGGCTT

Downstream 100 bases:

>100_bases
GGAAATAAATTGTTGACTGGTACTGTTCAGACTATCTTTAAAGGGAATTTTACTGATATGTTGTCGGGGTATCGTGTATT
TTCCAGACGCTATGTTAAAT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MYHSFNIAVIIPCYNEQKAIAKVINDFKTNIPTASIYVFDNNSTDSTAQVAEDAGATVHSVPLKGKGNVVRRMFSDVDAD
IYLMVDGDDTYDASSAPEMINHLIKNQLDMVVGCRQENGDQNTYRKGHR

Sequences:

>Translated_129_residues
MYHSFNIAVIIPCYNEQKAIAKVINDFKTNIPTASIYVFDNNSTDSTAQVAEDAGATVHSVPLKGKGNVVRRMFSDVDAD
IYLMVDGDDTYDASSAPEMINHLIKNQLDMVVGCRQENGDQNTYRKGHR
>Mature_129_residues
MYHSFNIAVIIPCYNEQKAIAKVINDFKTNIPTASIYVFDNNSTDSTAQVAEDAGATVHSVPLKGKGNVVRRMFSDVDAD
IYLMVDGDDTYDASSAPEMINHLIKNQLDMVVGCRQENGDQNTYRKGHR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RFBJ_SHIFL (P37786)

Other databases:

- EMBL:   X71970
- EMBL:   AE005674
- EMBL:   AE014073
- PIR:   E36966
- RefSeq:   NP_707927.1
- RefSeq:   NP_837654.1
- ProteinModelPortal:   P37786
- SMR:   P37786
- EnsemblBacteria:   EBESCT00000085217
- EnsemblBacteria:   EBESCT00000092906
- GeneID:   1026798
- GeneID:   1078512
- GenomeReviews:   AE005674_GR
- GenomeReviews:   AE014073_GR
- KEGG:   sfl:SF2095
- KEGG:   sfx:S2217
- GeneTree:   EBGT00050000014521
- HOGENOM:   HBG752660
- ProtClustDB:   CLSK396389
- BioCyc:   SFLE198214:AAN43634.1-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: NA

Molecular weight: Translated: 14331; Mature: 14331

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHSFNIAVIIPCYNEQKAIAKVINDFKTNIPTASIYVFDNNSTDSTAQVAEDAGATVHS
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCEEEE
VPLKGKGNVVRRMFSDVDADIYLMVDGDDTYDASSAPEMINHLIKNQLDMVVGCRQENGD
CCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCC
QNTYRKGHR
CCCCCCCCC
>Mature Secondary Structure
MYHSFNIAVIIPCYNEQKAIAKVINDFKTNIPTASIYVFDNNSTDSTAQVAEDAGATVHS
CCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCEEEE
VPLKGKGNVVRRMFSDVDADIYLMVDGDDTYDASSAPEMINHLIKNQLDMVVGCRQENGD
CCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCC
QNTYRKGHR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152