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The map label for this gene is erfK

Identifier: 30063442

GI number: 30063442

Start: 2055069

End: 2056004

Strand: Reverse

Name: erfK

Synonym: S2168

Alternate gene names: 30063442

Gene position: 2056004-2055069 (Counterclockwise)

Preceding gene: 30063443

Following gene: 30063441

Centisome position: 44.7

GC content: 49.04

Gene sequence:

>936_bases
ATGATGCGTCGTGTAAATATTCTTTGCTCATTTGCTCTGCTTTTTGCCAGCCAAAATAGCCTGGCGGTAACTTATCCATT
ACCTCCAGAGGGTAGCCGTTTAGTGGGGCAGTCGCTTACTGTAACTGTTCCTGATCACAATACTCAGCCGCTGGAGACTT
TTGCCGCACAATACGGGCAAGGGTTAAGTAATATGCTGGAAGCGAATCCGGGCGCTGATGTTTTTTTGCCGAAGCCTGGC
TCACAACTCACCATTCCGCAGCAACTGATTTTGCCCGCCACTGTTCGTAAAGGGATTGTGGTTAACGTCGCTGAAATGCG
TCTTTATTACTATCCGCCAGACAGTAATACAGTGGAAGTCTTTCCTATTGGTATCGGCCAGGCTGGGCGAGAAACCCCGC
GTAACTGGGTGACTACCGTTGAACGTAAACAAGAAGCACCAACCTGGACGCCAACGCCGAACATCCGGCGCGAATATGCG
AAACGAGGGGAGAGTTTGCCCGCATTTGTTCCTGCGGGGCCCGATAACCCCATGGGGCTGTACGCGATTTATATTGGCAG
GTTGTATGCCATCCACGGTACCAATGCCAATTTTGGTATTGGGCTCCGTGTAAGTCAGGGCTGTATTCGTCTGCGTAATG
ACGATATCAAATATCTGTTTGATAATGTTCCTGTAGGCACTCGTGTACAAATTATTGATCAGCCAGTGAAATACACAACG
GAACCGGATGGTTCAAAGTGGCTGGAAGTTCATGAGCCGCTGTCGCGCAATCGTGCAGAATATGAGTCTGACCGAAAAGT
GCCATTGCCGGTAACCCCATCTTTGCGGGCGTTTATCAACGGGCAAGAAGTTGATGTAAATCGCGCAAATGCTGCGTTGC
AACATCGATCGGGAATGCCTGTGCAAATTAGTTCTGGTTCAAGACAGATGTTTTAA

Upstream 100 bases:

>100_bases
GTTCTACCGGGGAATACGACTTCTGATTTGAACAGCTAAAAACGAAAAGTCTGATAAAAGCTATACTTATCGGATAGTAT
TCGCGACTTAGGAAAGGGAC

Downstream 100 bases:

>100_bases
GAGCGTTGGTAATTAGAAAGTAAAAAGCCTGCTCGAAAGCAGGCTTTTTTGAATTTGGCTCCTCTGACTGGACTCGAACC
AGTGACATACGGATTAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MMRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKPG
SQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRREYA
KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQHRSGMPVQISSGSRQMF

Sequences:

>Translated_311_residues
MMRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKPG
SQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRREYA
KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQHRSGMPVQISSGSRQMF
>Mature_311_residues
MMRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKPG
SQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRREYA
KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQHRSGMPVQISSGSRQMF

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=310, Percent_Identity=97.4193548387097, Blast_Score=620, Evalue=1e-179,
Organism=Escherichia coli, GI1787040, Length=304, Percent_Identity=62.171052631579, Blast_Score=396, Evalue=1e-112,
Organism=Escherichia coli, GI1787356, Length=285, Percent_Identity=49.4736842105263, Blast_Score=271, Evalue=3e-74,
Organism=Escherichia coli, GI1787968, Length=311, Percent_Identity=45.6591639871383, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 34486; Mature: 34486

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQ
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCC
GLSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEV
CHHHHHHCCCCCCEEECCCCCCEECCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEE
FPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRREYAKRGESLPAFVPAGPDNPMGL
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCEE
YAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EEEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCCC
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQHRSGMP
CCCCCCCEEECCCHHCCCHHHHCCCCCCCCCCCCHHHEECCCEEECHHHHHHHHHCCCCC
VQISSGSRQMF
EEECCCCCCCC
>Mature Secondary Structure
MMRRVNILCSFALLFASQNSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQ
CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCHHHHHHHHHCC
GLSNMLEANPGADVFLPKPGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEV
CHHHHHHCCCCCCEEECCCCCCEECCHHHHHHHHHHCCEEEEEEEEEEEEECCCCCEEEE
FPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRREYAKRGESLPAFVPAGPDNPMGL
EEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCEE
YAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTT
EEEEEEEEEEEECCCCCEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCCC
EPDGSKWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQHRSGMP
CCCCCCCEEECCCHHCCCHHHHCCCCCCCCCCCCHHHEECCCEEECHHHHHHHHHCCCCC
VQISSGSRQMF
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]