Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is tyrP
Identifier: 30063354
GI number: 30063354
Start: 1962619
End: 1963830
Strand: Direct
Name: tyrP
Synonym: S2046
Alternate gene names: 30063354
Gene position: 1962619-1963830 (Clockwise)
Preceding gene: 30063352
Following gene: 30063359
Centisome position: 42.67
GC content: 50.91
Gene sequence:
>1212_bases GTGAAAAACAGAACCCTGGGAAGTGTTTTTATCGTGGCGGGAACCACAATTGGCGCAGGCATGCTGGCAATGCCGCTGGC TGCGGCCGGTGTTGGTTTTAGCGTTACGTTAATCTTGTTGATTGGGCTTTGGGCGTTGATGTGCTACACGGCGCTATTAC TGCTGGAGGTGTACCAGCATGTTCCGGCAGATACCGGTCTGGGCACGCTGGCAAAACGCTATCTGGGACGCTACGGTCAA TGGCTGACAGGCTTCAGTATGATGTTCTTAATGTATGCTCTGACTGCAGCATACATCAGCGGTGCCGGTGAATTGTTGGC CTCCAGCATCAGCGACTGGACAGGTATTTCAATGTCGGCAACCGCTGGCGTGCTGTTGTTCACTTTTGTTGCCGGTGGCG TGGTTTGTGTTGGAACATCGCTGGTCGATTTATTTAACCGTTTTCTGTTCAGCGCCAAAATTATTTTTCTGGTGGTGATG CTGGTATTGCTGCTACCGCATATTCACAAAGTGAATCTTTTAACCCTGCCGTTGCAACAGGGGCTGGCACTGTCTGCAAT CCCGGTGATTTTTACGTCGTTTGGTTTTCACGGTAGCGTGCCGAGTATTGTCAGCTATATGGATGGCAACATTCGTAAGC TACGCTGGGTGTTTATAATCGGTAGTGCCATCCCCCTGGTGGCATATATTTTCTGGCAGGTGGCGACGCTTGGCAGCATT GATTCAACAACCTTTATGGGATTGCTGGCTAATCATGCTGGATTAAACGGGCTGTTACAGGCGTTACGCGAAATGGTGGC CTCTCCGCATGTTGAGCTGGCGGTGCATTTATTTGCTGATTTAGCCCTCGCCACGTCATTTCTCGGCGTTGCGTTAGGCT TATTTGATTATCTGGCTGATTTGTTTCAGCGTTCAAATACCGTTGGTGGACGATTGCAAACTGGTGCAATTACCTTTCTG CCGCCGTTGGCGTTTGCACTGTTTTATCCACGAGGATTTGTGATGGCGCTGGGTTACGCCGGTGTGGCGCTGGCGGTACT GGCATTGATTATCCCTTCACTATTGACCTGGCAAAGCAGAAAGCACAATCCTCAGGCGGGTTACCGGGTCAAAGGTGGTC GTCCGGCGCTGGTGGTGGTGTTTCTCTGTGGTATTGCTGTGATTGGCGTGCAATTTTTGATTGCGGCAGGGTTGTTACCA GAAGTGGGGTGA
Upstream 100 bases:
>100_bases ATATTTACACAATATGTAACGTCGGTTTGACGAAGCAGCCGTTATGCCTTAACCTGCGCCGCAGATATCACTCATAAAGA TCGTCAGGACAGAAGAAAGC
Downstream 100 bases:
>100_bases TCAGATAGCCTCAAATTCCTTATTGGGTGCCAGAATTAACGCTGACACCCAATGTGACCTCTTAATGCAGGCAGCACTGC TTAAATTTCTTACCACTGCC
Product: tyrosine-specific transport protein
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQ WLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVATLGSI DSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFL PPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLP EVG
Sequences:
>Translated_403_residues MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQ WLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVATLGSI DSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFL PPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLP EVG >Mature_403_residues MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQ WLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVATLGSI DSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFL PPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLP EVG
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily
Homologues:
Organism=Escherichia coli, GI1788218, Length=403, Percent_Identity=100, Blast_Score=790, Evalue=0.0, Organism=Escherichia coli, GI1789552, Length=384, Percent_Identity=32.2916666666667, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1790145, Length=410, Percent_Identity=32.9268292682927, Blast_Score=198, Evalue=4e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TYRP_ECOLI (P0AAD4)
Other databases:
- EMBL: M23240 - EMBL: U00096 - EMBL: AP009048 - PIR: C64954 - RefSeq: AP_002525.1 - RefSeq: NP_416420.1 - ProteinModelPortal: P0AAD4 - DIP: DIP-48105N - MINT: MINT-1305835 - STRING: P0AAD4 - EnsemblBacteria: EBESCT00000002514 - EnsemblBacteria: EBESCT00000002515 - EnsemblBacteria: EBESCT00000016717 - GeneID: 946412 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1895 - KEGG: eco:b1907 - EchoBASE: EB1034 - EcoGene: EG11041 - eggNOG: COG0814 - GeneTree: EBGT00050000009663 - HOGENOM: HBG482321 - OMA: SMLFLMY - ProtClustDB: PRK15132 - BioCyc: EcoCyc:TYRP-MONOMER - Genevestigator: P0AAD4 - InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 - PRINTS: PR00166 - TIGRFAMs: TIGR00837
Pfam domain/function: PF03222 Trp_Tyr_perm
EC number: NA
Molecular weight: Translated: 42820; Mature: 42820
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00594 AROMATIC_AA_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12fdf07c)-; HASH(0x12d52cd0)-; HASH(0x12d50fcc)-; HASH(0x1330dbdc)-; HASH(0x132b9b0c)-; HASH(0x132867ac)-; HASH(0x12ecd0fc)-; HASH(0x13604978)-; HASH(0x1311ed50)-; HASH(0x1344e644)-; HASH(0xf7e9dc4)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQH CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHC GLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVATLGSI CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEEECCHHHHHHHHHHHHHHCCCC DSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLAD CHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSR HHHCCCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLPEVG CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH >Mature Secondary Structure MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEVYQH CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGAGELLASSISDWTGISMSA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH TAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVMLVLLLPHIHKVNLLTLPLQQ HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHC GLALSAIPVIFTSFGFHGSVPSIVSYMDGNIRKLRWVFIIGSAIPLVAYIFWQVATLGSI CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHEEEEEEECCHHHHHHHHHHHHHHCCCC DSTTFMGLLANHAGLNGLLQALREMVASPHVELAVHLFADLALATSFLGVALGLFDYLAD CHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFVMALGYAGVALAVLALIIPSLLTWQSR HHHCCCCCCCEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KHNPQAGYRVKGGRPALVVVFLCGIAVIGVQFLIAAGLLPEVG CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503