Click here to switch to the map view.

The map label for this gene is ydjN [C]

Identifier: 30063123

GI number: 30063123

Start: 1697675

End: 1698721

Strand: Direct

Name: ydjN [C]

Synonym: S1762

Alternate gene names: 30063123

Gene position: 1697675-1698721 (Clockwise)

Preceding gene: 30063122

Following gene: 30063124

Centisome position: 36.91

GC content: 44.99

Gene sequence:

>1047_bases
ATGTCTTTAACTATTGTTGCCTGTATGTTGTGTTTAGTCATGATTGCAGGTTTAGTTGGCCTGGCTATTGCCAGTGCAAT
TGGCCTTGATGCCAGCGCCTTTGGTCATATGCAATCCTCTTTAACCAGCGATGACGTCTCGAAAACAGCTGCGGTATCTT
TACCGCGACTCATTACGTCATTGATCCCAACCAACCTCTTCCTTGATCTGACCGGGGCAAGAAGTGTTTCGGTTATTGGC
ATCGTCATCTTTACAATTCTTGCTGGTATTGCGCTGTTAAAAGTAAAGAAAGATGCACCAGCAGAGGGCGAAAAATTGAG
CGCGGGGATCAACGCGATTCAAATATGGGTAATGAAAATGGTCCGTATTGTCATTGCGCTGACGCCTTATGGGGTAATGG
CACTAATGGCGAAAGTCTTCTCAACGTATCAGCTTTCACAGTTTACCAATTTGCTCGGGTTCATCGTCGCCTGTTATCTG
GCCGTTTTTGTGATGTTTATTGTTCACTCGGGCATTTTGCTGTTAATAGGTAAAAACCCCGTTAACTATTACAAGACCGT
CTGGCAAGTACTTACCTTTGCGTTTGTTTCTCGCAGTAGTGCGGCTTCAATTCCTCTGGCTATTTCTGCATTGGAAAAAT
TGGGGGTTCCAAATACGATTGCTAATATTGCAGCGTCTTTTGGTTCCAGCATGGGACAAAATGGCTGCGCTGGGATTTAT
CCTGCCGTGATGGTGGCGATGATTGCTCCAACAATGGGTATCGATCCCTTCTCATTGCAATTCCTCGCAACTCTTTTACC
TGCCATCGCGCTTGGCTCAATAGGGGTAGCAGGCGTAGGTAGTGGTGGGACATTCGCGGCGCTGATTGTCCTTTCAACAC
TTAATTTCCCTGTCGCATTAGTAGTTATTTTTATTGCCATAGAGCCGATCGTTGATATGGCAAGAACAGCGCTTAATGTG
AATGGTTCAATAATGTCCGGTGTAATATCAGCCCGTCTTCTTAAGGATAGAGAGACTAAAGAACAACAAAGCGTCACGTT
AAATTAA

Upstream 100 bases:

>100_bases
CGGTTATGTTAATTTATTAAAACTTGTTGCCGTTCCACTCATATTCATTTCGATTCTTTCAGCGATTAATAAGCTCGAAA
ATAGCGCTGGTATTGGCAAG

Downstream 100 bases:

>100_bases
ACCTTAGCATAATAAACAAGCCCCGGTGGAAAATTGAATTTACTGAATATGAATACACCGGGGATACATCCGTCTGTTCC
GGACATTATCTTCCAAACAA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSLTIVACMLCLVMIAGLVGLAIASAIGLDASAFGHMQSSLTSDDVSKTAAVSLPRLITSLIPTNLFLDLTGARSVSVIG
IVIFTILAGIALLKVKKDAPAEGEKLSAGINAIQIWVMKMVRIVIALTPYGVMALMAKVFSTYQLSQFTNLLGFIVACYL
AVFVMFIVHSGILLLIGKNPVNYYKTVWQVLTFAFVSRSSAASIPLAISALEKLGVPNTIANIAASFGSSMGQNGCAGIY
PAVMVAMIAPTMGIDPFSLQFLATLLPAIALGSIGVAGVGSGGTFAALIVLSTLNFPVALVVIFIAIEPIVDMARTALNV
NGSIMSGVISARLLKDRETKEQQSVTLN

Sequences:

>Translated_348_residues
MSLTIVACMLCLVMIAGLVGLAIASAIGLDASAFGHMQSSLTSDDVSKTAAVSLPRLITSLIPTNLFLDLTGARSVSVIG
IVIFTILAGIALLKVKKDAPAEGEKLSAGINAIQIWVMKMVRIVIALTPYGVMALMAKVFSTYQLSQFTNLLGFIVACYL
AVFVMFIVHSGILLLIGKNPVNYYKTVWQVLTFAFVSRSSAASIPLAISALEKLGVPNTIANIAASFGSSMGQNGCAGIY
PAVMVAMIAPTMGIDPFSLQFLATLLPAIALGSIGVAGVGSGGTFAALIVLSTLNFPVALVVIFIAIEPIVDMARTALNV
NGSIMSGVISARLLKDRETKEQQSVTLN
>Mature_347_residues
SLTIVACMLCLVMIAGLVGLAIASAIGLDASAFGHMQSSLTSDDVSKTAAVSLPRLITSLIPTNLFLDLTGARSVSVIGI
VIFTILAGIALLKVKKDAPAEGEKLSAGINAIQIWVMKMVRIVIALTPYGVMALMAKVFSTYQLSQFTNLLGFIVACYLA
VFVMFIVHSGILLLIGKNPVNYYKTVWQVLTFAFVSRSSAASIPLAISALEKLGVPNTIANIAASFGSSMGQNGCAGIYP
AVMVAMIAPTMGIDPFSLQFLATLLPAIALGSIGVAGVGSGGTFAALIVLSTLNFPVALVVIFIAIEPIVDMARTALNVN
GSIMSGVISARLLKDRETKEQQSVTLN

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI223468564, Length=278, Percent_Identity=27.3381294964029, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI223468566, Length=280, Percent_Identity=27.1428571428571, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI5032093, Length=280, Percent_Identity=27.1428571428571, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI194239697, Length=301, Percent_Identity=26.578073089701, Blast_Score=79, Evalue=9e-15,
Organism=Homo sapiens, GI4827012, Length=281, Percent_Identity=26.6903914590747, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI21314632, Length=284, Percent_Identity=26.4084507042254, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI169790839, Length=318, Percent_Identity=25.7861635220126, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI66773030, Length=280, Percent_Identity=27.8571428571429, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI40254478, Length=290, Percent_Identity=24.8275862068966, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1788024, Length=348, Percent_Identity=47.9885057471264, Blast_Score=290, Evalue=9e-80,
Organism=Escherichia coli, GI1790514, Length=287, Percent_Identity=26.4808362369338, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17537407, Length=252, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71983106, Length=286, Percent_Identity=26.5734265734266, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71983099, Length=286, Percent_Identity=26.5734265734266, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71996953, Length=278, Percent_Identity=24.1007194244604, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193206654, Length=240, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24583025, Length=267, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17137668, Length=267, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24583023, Length=267, Percent_Identity=24.7191011235955, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 36290; Mature: 36159

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTIVACMLCLVMIAGLVGLAIASAIGLDASAFGHMQSSLTSDDVSKTAAVSLPRLITS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LIPTNLFLDLTGARSVSVIGIVIFTILAGIALLKVKKDAPAEGEKLSAGINAIQIWVMKM
HHCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
VRIVIALTPYGVMALMAKVFSTYQLSQFTNLLGFIVACYLAVFVMFIVHSGILLLIGKNP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
VNYYKTVWQVLTFAFVSRSSAASIPLAISALEKLGVPNTIANIAASFGSSMGQNGCAGIY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
PAVMVAMIAPTMGIDPFSLQFLATLLPAIALGSIGVAGVGSGGTFAALIVLSTLNFPVAL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VVIFIAIEPIVDMARTALNVNGSIMSGVISARLLKDRETKEQQSVTLN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLTIVACMLCLVMIAGLVGLAIASAIGLDASAFGHMQSSLTSDDVSKTAAVSLPRLITS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LIPTNLFLDLTGARSVSVIGIVIFTILAGIALLKVKKDAPAEGEKLSAGINAIQIWVMKM
HHCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
VRIVIALTPYGVMALMAKVFSTYQLSQFTNLLGFIVACYLAVFVMFIVHSGILLLIGKNP
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
VNYYKTVWQVLTFAFVSRSSAASIPLAISALEKLGVPNTIANIAASFGSSMGQNGCAGIY
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
PAVMVAMIAPTMGIDPFSLQFLATLLPAIALGSIGVAGVGSGGTFAALIVLSTLNFPVAL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
VVIFIAIEPIVDMARTALNVNGSIMSGVISARLLKDRETKEQQSVTLN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]