Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yneG
Identifier: 30063074
GI number: 30063074
Start: 1641623
End: 1641967
Strand: Direct
Name: yneG
Synonym: S1697
Alternate gene names: 30063074
Gene position: 1641623-1641967 (Clockwise)
Preceding gene: 30063073
Following gene: 30063075
Centisome position: 35.69
GC content: 53.04
Gene sequence:
>345_bases ATGCAGTCTCTCGATCCACTCTTCGCGCGTTTATCCCGTTCAAAATTTCGCTCTCGCTTTCGTCTGGGCATGAAAGAGCG TCAGTATTGCCTGGAGAAAGGCGCGCCAGTCATCGAACAACATGCGGCGGATTTTGTCGCTAAACGTCTTGCTCCGGCAT TACCGGCTAATGACGGTAAGCAAACCCCCATGCGCGGGCATCCGGTGTTTATCGCTCAGCACGCCACCGCGACCTGCTGT CGCGGTTGTCTGGCTAAGTGGCATAACATTCCGCAGGGTGTTTCGTTAAGCGAAGAACAACAACGTTATATCGTGGCGGT AATCTATCACTGGCTGGTTGTATAG
Upstream 100 bases:
>100_bases TCGCAGTCTGGAGTCCGGAACTGGATGATGCAGGTAACTCGCTTGCGGGTATCGCCGTCCTTGAACAATTGACGAAACAG TTAGGGCGTTCGGTTTATTA
Downstream 100 bases:
>100_bases ATGAATCAGCCATGAGAATTGCGGAAAACGATAAAATAGCATTCCCAGGGTACCTTTATTTGCCGCCGCTGTTAGCGAAC ATGCTATCCTTTATGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCC RGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV
Sequences:
>Translated_114_residues MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCC RGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV >Mature_114_residues MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCC RGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787803, Length=114, Percent_Identity=100, Blast_Score=240, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YNEG_ECOLI (P76148)
Other databases:
- EMBL: U00096 - EMBL: AP009048 - PIR: F64906 - RefSeq: AP_002144.1 - RefSeq: NP_416040.1 - ProteinModelPortal: P76148 - DIP: DIP-12756N - STRING: P76148 - EnsemblBacteria: EBESCT00000002583 - EnsemblBacteria: EBESCT00000014951 - GeneID: 946171 - GenomeReviews: AP009048_GR - GenomeReviews: U00096_GR - KEGG: ecj:JW1516 - KEGG: eco:b1523 - EchoBASE: EB3576 - EcoGene: EG13815 - eggNOG: NOG12109 - GeneTree: EBGT00050000010568 - HOGENOM: HBG546172 - OMA: MAWIERD - ProtClustDB: CLSK880026 - BioCyc: EcoCyc:G6809-MONOMER - Genevestigator: P76148 - InterPro: IPR020378 - ProDom: PD076485
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12945; Mature: 12945
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC QTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC QTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503