Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

Click here to switch to the map view.

The map label for this gene is yneG

Identifier: 30063074

GI number: 30063074

Start: 1641623

End: 1641967

Strand: Direct

Name: yneG

Synonym: S1697

Alternate gene names: 30063074

Gene position: 1641623-1641967 (Clockwise)

Preceding gene: 30063073

Following gene: 30063075

Centisome position: 35.69

GC content: 53.04

Gene sequence:

>345_bases
ATGCAGTCTCTCGATCCACTCTTCGCGCGTTTATCCCGTTCAAAATTTCGCTCTCGCTTTCGTCTGGGCATGAAAGAGCG
TCAGTATTGCCTGGAGAAAGGCGCGCCAGTCATCGAACAACATGCGGCGGATTTTGTCGCTAAACGTCTTGCTCCGGCAT
TACCGGCTAATGACGGTAAGCAAACCCCCATGCGCGGGCATCCGGTGTTTATCGCTCAGCACGCCACCGCGACCTGCTGT
CGCGGTTGTCTGGCTAAGTGGCATAACATTCCGCAGGGTGTTTCGTTAAGCGAAGAACAACAACGTTATATCGTGGCGGT
AATCTATCACTGGCTGGTTGTATAG

Upstream 100 bases:

>100_bases
TCGCAGTCTGGAGTCCGGAACTGGATGATGCAGGTAACTCGCTTGCGGGTATCGCCGTCCTTGAACAATTGACGAAACAG
TTAGGGCGTTCGGTTTATTA

Downstream 100 bases:

>100_bases
ATGAATCAGCCATGAGAATTGCGGAAAACGATAAAATAGCATTCCCAGGGTACCTTTATTTGCCGCCGCTGTTAGCGAAC
ATGCTATCCTTTATGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCC
RGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV

Sequences:

>Translated_114_residues
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCC
RGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV
>Mature_114_residues
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCC
RGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787803, Length=114, Percent_Identity=100, Blast_Score=240, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNEG_ECOLI (P76148)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   F64906
- RefSeq:   AP_002144.1
- RefSeq:   NP_416040.1
- ProteinModelPortal:   P76148
- DIP:   DIP-12756N
- STRING:   P76148
- EnsemblBacteria:   EBESCT00000002583
- EnsemblBacteria:   EBESCT00000014951
- GeneID:   946171
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW1516
- KEGG:   eco:b1523
- EchoBASE:   EB3576
- EcoGene:   EG13815
- eggNOG:   NOG12109
- GeneTree:   EBGT00050000010568
- HOGENOM:   HBG546172
- OMA:   MAWIERD
- ProtClustDB:   CLSK880026
- BioCyc:   EcoCyc:G6809-MONOMER
- Genevestigator:   P76148
- InterPro:   IPR020378
- ProDom:   PD076485

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12945; Mature: 12945

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
QTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV
CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAADFVAKRLAPALPANDGK
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCC
QTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQRYIVAVIYHWLVV
CCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503