Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yeaE [H]
Identifier: 30062957
GI number: 30062957
Start: 1515578
End: 1516339
Strand: Direct
Name: yeaE [H]
Synonym: S1557
Alternate gene names: 30062957
Gene position: 1515578-1516339 (Clockwise)
Preceding gene: 30062956
Following gene: 30062960
Centisome position: 32.95
GC content: 50.39
Gene sequence:
>762_bases ATGCAACAAAAAATGATTCAATTTAGTGGCGATGTCTCACTGCCAGCCATAGGGCAGGGAACATGGTATATGGGCGAAGA TGCCAGTCAGCGCAAAACAGAAGTTGCTGCACTACGCGCAGGCATTGAACTCGGTTTAACCCTCATTGATACCGCCGAAA TGTATGCCGATGGCGGTGCCGAAAAGGTGGTTGGGGAAGCATTAACCGGTCTGCGAGAGAAGGTCTTTCTCGTCTCTAAA GTCTATCCGTGGAATGCTGGCGGGCAAAAAGCGATAAATGCATGCGAAGCCAGTTTACGCCGTCTCAATACTGACTATCT CGATCTCTACTTATTACACTGGTCTGGCAGTTTCGCTTTTGAAGAGACTGTTGCTGCGATGGAAAAATTGATCGCCCAGG GAAAAATCCGTCGCTGGGGCGTTTCTAACCTTGGTTATGCCGATATGCAGGAACTCTGGCAGCTGCCGGGGGGAAATCAG TGTGCCACTAATCAGGTGCTTTACCATCTCGGTTCACGAGGGATTGAGTACGATCTACTCCCCTGGTGCCAGCAACAGCA GATGCCGGTGATGGCTTACAGTCCATTAGCCCAGGCCGGGCGGTTGCGCAATGGACTGTTAAAAAACGCGGTAGTCAACG AAATTGCACATGTCCAACAACATGCAGCTGCGCTTGAGGTCGAACTTTCGTCAGCGGAATTAGCTATGCTGGATAAGGCA TATCCGGCACCAAAAGGAAAAACTGCGCTGGATATGGTGTGA
Upstream 100 bases:
>100_bases ACAAATTCTGATAATGCATCTTTCCAGGGCATTTTGTGCATAAAAACAGGGCGTCACGCCCTGTTTTGCATTACGGTGGT GCAATACCTGGGAGGAAACA
Downstream 100 bases:
>100_bases TGTTGATACGTGCCGGATGCATCGCACCCGGCACACAACATTAACGCAAATTAACGTTTGGCAACGCGAATGGATTGCGC CAGATGTGCAGGTTTCTCTT
Product: putative aldehyde reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSK VYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLGYADMQELWQLPGGNQ CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHVQQHAAALEVELSSAELAMLDKA YPAPKGKTALDMV
Sequences:
>Translated_253_residues MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSK VYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLGYADMQELWQLPGGNQ CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHVQQHAAALEVELSSAELAMLDKA YPAPKGKTALDMV >Mature_253_residues MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSK VYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLGYADMQELWQLPGGNQ CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHVQQHAAALEVELSSAELAMLDKA YPAPKGKTALDMV
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI223468663, Length=253, Percent_Identity=28.4584980237154, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI291291012, Length=246, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI223718702, Length=200, Percent_Identity=32, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI310109922, Length=193, Percent_Identity=31.0880829015544, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI24497577, Length=216, Percent_Identity=28.7037037037037, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI5174391, Length=216, Percent_Identity=28.7037037037037, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI41327764, Length=171, Percent_Identity=30.9941520467836, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1788081, Length=284, Percent_Identity=87.6760563380282, Blast_Score=498, Evalue=1e-142, Organism=Escherichia coli, GI87081735, Length=200, Percent_Identity=32.5, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788070, Length=234, Percent_Identity=29.9145299145299, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1786400, Length=204, Percent_Identity=28.4313725490196, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87082198, Length=209, Percent_Identity=30.622009569378, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1789199, Length=241, Percent_Identity=30.7053941908714, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1789375, Length=235, Percent_Identity=25.531914893617, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17552492, Length=221, Percent_Identity=32.579185520362, Blast_Score=96, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17564128, Length=230, Percent_Identity=29.5652173913043, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71998625, Length=215, Percent_Identity=31.6279069767442, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17561298, Length=237, Percent_Identity=30.379746835443, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17561300, Length=243, Percent_Identity=28.8065843621399, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17550248, Length=218, Percent_Identity=26.605504587156, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17566692, Length=216, Percent_Identity=27.3148148148148, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17537077, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17537075, Length=239, Percent_Identity=28.0334728033473, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6324694, Length=245, Percent_Identity=30.2040816326531, Blast_Score=79, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6320079, Length=212, Percent_Identity=29.2452830188679, Blast_Score=76, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6322556, Length=222, Percent_Identity=26.5765765765766, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24644950, Length=233, Percent_Identity=30.0429184549356, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI45553081, Length=221, Percent_Identity=24.4343891402715, Blast_Score=74, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 27736; Mature: 27736
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGA CCCCCEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCH EKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAF HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH EETVAAMEKLIAQGKIRRWGVSNLGYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLL HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC PWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHVQQHAAALEVELSSAELAMLDKA CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHC YPAPKGKTALDMV CCCCCCCCCCCCC >Mature Secondary Structure MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGA CCCCCEEECCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCH EKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACEASLRRLNTDYLDLYLLHWSGSFAF HHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHH EETVAAMEKLIAQGKIRRWGVSNLGYADMQELWQLPGGNQCATNQVLYHLGSRGIEYDLL HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC PWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHVQQHAAALEVELSSAELAMLDKA CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHC YPAPKGKTALDMV CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]