BacMap

Definition	Shigella flexneri 2a str. 2457T, complete genome.
Accession	NC_004741
Length	4,599,354

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The map label for this gene is dbpA

Identifier: 30062866

GI number: 30062866

Start: 1410534

End: 1411901

Strand: Direct

Name: dbpA

Synonym: S1447

Alternate gene names: 30062866

Gene position: 1410534-1411901 (Clockwise)

Preceding gene: 30062865

Following gene: 30062875

Centisome position: 30.67

GC content: 51.61

Gene sequence:

>1368_bases
GTGACCGCTTTTTCTACCCTGAATGTTTTGCCTCCCGCCCAACTCACGAACCTTAATGAGTTGGGTTATTTAACCATGAC
GCCGGTGCAGGCCGCCGCGCTTCCGGCGATCCTTGCCGGAAAAGATGTTCGCGTGCAGGCGAAAACCGGCAGCGGCAAAA
CGGCGGCTTTTGGCCTCGGCTTGTTACAGCAAATTGATGCGTCGCTATTTCAAACCCAGGCTTTAGTGCTGTGTCCTACG
CGTGAACTGGCGGATCAGGTGGCAGGTGAATTGCGTCGGCTGGCGCGTTTTCTGCCAAATACCAAAATTTTGACGTTGTG
CGGTGGTCAACCGTTCGGTATGCAGCGTGATTCGCTGCAACATGCGCCGCATATTATCGTGGCAACGCCGGGTCGTTTGC
TGGATCACTTGCAAAAAGGCACGGTATCACTGGATGCGCTGAATACTTTGGTGATGGATGAGGCCGACCGCATGCTGGAT
ATGGGATTTAGCGATGCCATTGATGATGTCATCCGTTTTGCGCCTGCATCTCGACAGACGCTTCTGTTTTCGGCAACCTG
GCCGGAAGCCATCGCCGCAATCAGCGGACGAGTGCAACGCGATCCTTTGGCGATTGAAATTGACTCAACAGATGCTTTGC
CACCCATTGAACAACAATTTTATGAGACATCCAGTAAAGGCAAAATTCCTCTGTTGCAACGGTTATTAAGCTTGCATCAG
CCATCCTCTTGTGTGGTGTTTTGCAATACCAAAAAAGATTGCCAGGCTGTCTGCGACGCGCTGAATGAAGTAGAGCAAAG
TGCATTGTCGTTACACGGCGATCTGGAGCAACGCGATCAGACCCTGGTACGTTTTGCTAACGGTAGCGCCCGTGTACTGG
TTGCGACTGATGTTGCTGCGCGTGGTCTGGATATTAAATCGCTTGAGCTGGTGGTGAACTTTGAGCTGGCGTGGGACCCT
GAAGTTCATGTACATCGCATCGGTCGTACAGCTCGTGCAGGAAATAGCGGTCTGGCGATCAGTTTCTGTGCTCCGGAAGA
AGCACAGCGGGCCAATATCATTTCTGACATGTTGCAGATAAAACTTAACTGGCAAACGCCGCCAGCTAATAGTTCCATTG
TGACGCTGGAAGCAGAAATGGCAACGTTGTGTATCGATGGCGGGAAAAAAGCCAAAATGCGCCCGGGTGATGTATTAGGT
GCACTGACAGGAGATATCGGGCTTGATGGCGCAGATATTGGCAAAATCGCCGTGCATCCGGCGCATGTCTATGTCGCGGT
CCGTCAGGCTGTTGCTCATAAAGCATGGAAACAGTTACAGGGCGGGAAGATTAAAGGAAAAACGTGCCGGGTGCGGTTAT
TAAAATAA

Upstream 100 bases:

>100_bases
CACCACCCGATGAAGAACCGATTAAATTGTCGCATCGTGAGCGTAGATCTGCGAGGATACGCGCCTGCTAACTTTGCGTC
GATGACCACGAGAATAGATT

Downstream 100 bases:

>100_bases
TGAAATGTTGAATTGCCGGGTGCAAGAGTAAACATCTTATTCGGGATTGCCAGATGCGACGCTGGCCGCGTCTTATCCGG
CCTCCATAAGAGTAGCCCGA

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLEQRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDP
EVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLG
ALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK

Sequences:

>Translated_455_residues
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT
RELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
PSSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLEQRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDP
EVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLG
ALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
>Mature_454_residues
TAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTR
ELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDM
GFSDAIDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQP
SSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLEQRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPE
VHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLGA
LTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=37.1657754010695, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI7661920, Length=349, Percent_Identity=34.3839541547278, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=31.0055865921788, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI21071032, Length=350, Percent_Identity=37.4285714285714, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=37.1508379888268, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=34.1902313624679, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI20149629, Length=349, Percent_Identity=36.676217765043, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI224593278, Length=355, Percent_Identity=37.4647887323944, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI45446747, Length=348, Percent_Identity=35.9195402298851, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI45446743, Length=348, Percent_Identity=35.9195402298851, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI262118318, Length=361, Percent_Identity=37.9501385041551, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI262231852, Length=361, Percent_Identity=37.9501385041551, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI216548263, Length=361, Percent_Identity=37.9501385041551, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI13518015, Length=361, Percent_Identity=37.9501385041551, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=37.2654155495979, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=37.2654155495979, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=37.2654155495979, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI4758112, Length=362, Percent_Identity=30.3867403314917, Blast_Score=198, Evalue=9e-51,
Organism=Homo sapiens, GI18375623, Length=362, Percent_Identity=30.3867403314917, Blast_Score=198, Evalue=9e-51,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=36.5591397849462, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=36.5591397849462, Blast_Score=198, Evalue=1e-50,
Organism=Homo sapiens, GI148613856, Length=372, Percent_Identity=34.4086021505376, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI38201710, Length=372, Percent_Identity=34.4086021505376, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI21040371, Length=361, Percent_Identity=30.4709141274238, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI38327634, Length=361, Percent_Identity=36.2880886426593, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI4758138, Length=349, Percent_Identity=34.9570200573066, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=34.5646437994723, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI13129006, Length=347, Percent_Identity=35.1585014409222, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI222352149, Length=359, Percent_Identity=33.983286908078, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI83700235, Length=351, Percent_Identity=34.1880341880342, Blast_Score=189, Evalue=7e-48,
Organism=Homo sapiens, GI4503529, Length=352, Percent_Identity=34.0909090909091, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI188035877, Length=348, Percent_Identity=37.3563218390805, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=34.375, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=34.375, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI41327779, Length=386, Percent_Identity=32.3834196891192, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=31.3390313390313, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI41327776, Length=346, Percent_Identity=33.5260115606936, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI13514831, Length=381, Percent_Identity=34.6456692913386, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI256223453, Length=364, Percent_Identity=31.5934065934066, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI164419732, Length=374, Percent_Identity=31.8181818181818, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI8922886, Length=347, Percent_Identity=31.700288184438, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI6005743, Length=347, Percent_Identity=31.700288184438, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI62241022, Length=336, Percent_Identity=31.8452380952381, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI17505907, Length=421, Percent_Identity=30.8788598574822, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI62241024, Length=359, Percent_Identity=31.1977715877437, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI9506931, Length=391, Percent_Identity=28.9002557544757, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI38569503, Length=359, Percent_Identity=27.5766016713092, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI38569505, Length=359, Percent_Identity=27.5766016713092, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI4826686, Length=340, Percent_Identity=28.8235294117647, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI256773275, Length=357, Percent_Identity=32.2128851540616, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI9966805, Length=308, Percent_Identity=32.4675324675325, Blast_Score=123, Evalue=4e-28,
Organism=Homo sapiens, GI154759257, Length=398, Percent_Identity=29.8994974874372, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI20336298, Length=235, Percent_Identity=34.8936170212766, Blast_Score=109, Evalue=4e-24,
Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=99.1247264770241, Blast_Score=917, Evalue=0.0,
Organism=Escherichia coli, GI87082221, Length=349, Percent_Identity=43.2664756446991, Blast_Score=274, Evalue=9e-75,
Organism=Escherichia coli, GI1787016, Length=386, Percent_Identity=38.60103626943, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=36.4672364672365, Blast_Score=192, Evalue=3e-50,
Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=37.910447761194, Blast_Score=181, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=34.7945205479452, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI71995724, Length=349, Percent_Identity=35.243553008596, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI71987143, Length=334, Percent_Identity=35.3293413173653, Blast_Score=221, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=38.0821917808219, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=357, Percent_Identity=38.0952380952381, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17510307, Length=357, Percent_Identity=38.0952380952381, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=357, Percent_Identity=38.375350140056, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI71982858, Length=361, Percent_Identity=30.7479224376731, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=30.5714285714286, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=361, Percent_Identity=35.1800554016621, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=36.5079365079365, Blast_Score=195, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17507877, Length=394, Percent_Identity=33.756345177665, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=35.4570637119114, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17510559, Length=368, Percent_Identity=35.054347826087, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=34.2175066312997, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI86570094, Length=346, Percent_Identity=37.2832369942197, Blast_Score=191, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17507879, Length=387, Percent_Identity=33.3333333333333, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI115532546, Length=353, Percent_Identity=33.9943342776204, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17552642, Length=337, Percent_Identity=34.7181008902077, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71999646, Length=336, Percent_Identity=35.1190476190476, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71999644, Length=336, Percent_Identity=35.1190476190476, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI115532548, Length=353, Percent_Identity=33.7110481586402, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17507881, Length=364, Percent_Identity=32.967032967033, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17505370, Length=339, Percent_Identity=35.693215339233, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17536099, Length=412, Percent_Identity=31.3106796116505, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17536101, Length=412, Percent_Identity=31.3106796116505, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17536103, Length=403, Percent_Identity=31.5136476426799, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17537549, Length=379, Percent_Identity=31.3984168865435, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=32.2766570605187, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17553716, Length=350, Percent_Identity=30, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI193206561, Length=329, Percent_Identity=30.6990881458967, Blast_Score=158, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=399, Percent_Identity=27.8195488721804, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=30.8900523560209, Blast_Score=137, Evalue=8e-33,
Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=31.6753926701571, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=28.894472361809, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71982862, Length=195, Percent_Identity=32.8205128205128, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=359, Percent_Identity=28.6908077994429, Blast_Score=124, Evalue=9e-29,
Organism=Caenorhabditis elegans, GI25148203, Length=406, Percent_Identity=26.6009852216749, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI32564046, Length=376, Percent_Identity=29.7872340425532, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=399, Percent_Identity=27.8195488721804, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.4924471299094, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=40.2173913043478, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=36.3888888888889, Blast_Score=217, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321360, Length=345, Percent_Identity=40, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=33.5106382978723, Blast_Score=210, Evalue=5e-55,
Organism=Saccharomyces cerevisiae, GI6321856, Length=374, Percent_Identity=37.1657754010695, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6324217, Length=374, Percent_Identity=36.6310160427808, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6323947, Length=361, Percent_Identity=37.3961218836565, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=34.7480106100796, Blast_Score=196, Evalue=8e-51,
Organism=Saccharomyces cerevisiae, GI6320041, Length=329, Percent_Identity=32.5227963525836, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6321963, Length=365, Percent_Identity=35.8904109589041, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6325138, Length=389, Percent_Identity=34.4473007712082, Blast_Score=190, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=30.8988764044944, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6320449, Length=401, Percent_Identity=31.1720698254364, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=34.375, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6322912, Length=331, Percent_Identity=33.5347432024169, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6322323, Length=331, Percent_Identity=33.5347432024169, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6324620, Length=359, Percent_Identity=31.7548746518106, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=32.0547945205479, Blast_Score=169, Evalue=7e-43,
Organism=Saccharomyces cerevisiae, GI6320173, Length=394, Percent_Identity=30.4568527918782, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6319618, Length=407, Percent_Identity=29.2383292383292, Blast_Score=165, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=438, Percent_Identity=29.4520547945205, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=356, Percent_Identity=29.2134831460674, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6321267, Length=349, Percent_Identity=31.2320916905444, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6324366, Length=357, Percent_Identity=25.2100840336134, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6323306, Length=211, Percent_Identity=30.8056872037915, Blast_Score=95, Evalue=3e-20,
Organism=Saccharomyces cerevisiae, GI6321374, Length=413, Percent_Identity=23.728813559322, Blast_Score=91, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6322876, Length=159, Percent_Identity=34.5911949685535, Blast_Score=83, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=39.0449438202247, Blast_Score=235, Evalue=6e-62,
Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=34.2465753424658, Blast_Score=221, Evalue=7e-58,
Organism=Drosophila melanogaster, GI17136814, Length=363, Percent_Identity=37.7410468319559, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=35.2941176470588, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI21356161, Length=373, Percent_Identity=34.5844504021448, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI28575014, Length=340, Percent_Identity=36.1764705882353, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI28574962, Length=366, Percent_Identity=35.792349726776, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24585582, Length=345, Percent_Identity=35.9420289855072, Blast_Score=200, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24583281, Length=335, Percent_Identity=32.8358208955224, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24662330, Length=367, Percent_Identity=35.4223433242507, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24583279, Length=335, Percent_Identity=32.8358208955224, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=38.1471389645777, Blast_Score=195, Evalue=7e-50,
Organism=Drosophila melanogaster, GI281361218, Length=386, Percent_Identity=34.4559585492228, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24644481, Length=386, Percent_Identity=34.4559585492228, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24644487, Length=386, Percent_Identity=34.4559585492228, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI45551833, Length=386, Percent_Identity=34.4559585492228, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24644485, Length=386, Percent_Identity=34.4559585492228, Blast_Score=192, Evalue=4e-49,
Organism=Drosophila melanogaster, GI24644483, Length=386, Percent_Identity=34.4559585492228, Blast_Score=192, Evalue=5e-49,
Organism=Drosophila melanogaster, GI24582080, Length=375, Percent_Identity=33.6, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24582078, Length=375, Percent_Identity=33.6, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI17136248, Length=375, Percent_Identity=33.6, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24582075, Length=375, Percent_Identity=33.6, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24644479, Length=386, Percent_Identity=34.4559585492228, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI17977678, Length=349, Percent_Identity=35.243553008596, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24581954, Length=363, Percent_Identity=30.5785123966942, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24581952, Length=363, Percent_Identity=30.5785123966942, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24581956, Length=363, Percent_Identity=30.5785123966942, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI18857967, Length=370, Percent_Identity=34.0540540540541, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=32.6259946949602, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=34.0782122905028, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=34.0782122905028, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=32.5068870523416, Blast_Score=185, Evalue=6e-47,
Organism=Drosophila melanogaster, GI21355559, Length=406, Percent_Identity=33.2512315270936, Blast_Score=168, Evalue=7e-42,
Organism=Drosophila melanogaster, GI281365720, Length=308, Percent_Identity=35.7142857142857, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=29.7450424929178, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24643725, Length=388, Percent_Identity=28.8659793814433, Blast_Score=145, Evalue=5e-35,
Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=29.1005291005291, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.9093655589124, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=30.2702702702703, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI19920478, Length=355, Percent_Identity=29.5774647887324, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI20130173, Length=332, Percent_Identity=28.0120481927711, Blast_Score=119, Evalue=6e-27,
Organism=Drosophila melanogaster, GI28571338, Length=231, Percent_Identity=32.9004329004329, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI18859659, Length=231, Percent_Identity=32.9004329004329, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24640164, Length=371, Percent_Identity=23.4501347708895, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI17136666, Length=222, Percent_Identity=27.4774774774775, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49017; Mature: 48886

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
CCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
EEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCC
PSSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLEQRDQTLVRFANGSARVLVATDVAA
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEEEEEECHHH
RGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQI
CCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCEEEEEECCCHHHHHHHHHHHHEE
KLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHP
EEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECH
AHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG
CCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
LLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQ
HHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHC
HAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQT
CCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE
LLFSATWPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQ
EEEECCCHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCC
PSSCVVFCNTKKDCQAVCDALNEVEQSALSLHGDLEQRDQTLVRFANGSARVLVATDVAA
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCEEEEEEECHHH
RGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQI
CCCCEEEEEEEEEEEEEECCCCHHEECCCHHCCCCCCEEEEEECCCHHHHHHHHHHHHEE
KLNWQTPPANSSIVTLEAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAVHP
EEEECCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECH
AHVYVAVRQAVAHKAWKQLQGGKIKGKTCRVRLLK
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]