Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is 30062349
Identifier: 30062349
GI number: 30062349
Start: 846667
End: 848436
Strand: Direct
Name: 30062349
Synonym: S4814
Alternate gene names: NA
Gene position: 846667-848436 (Clockwise)
Preceding gene: 30062341
Following gene: 30062350
Centisome position: 18.41
GC content: 33.11
Gene sequence:
>1770_bases ATGATAAACAATATATCTGATCAAGCATCATCATTTCCAGGCACACAACTAAATCAAAGTGATAATTTCCTGGATTCACT GAGGGAATTTTTCGCGATATTAAATCCCAGTCGTAAGGGTGAGTTGTCTACATGGGATACCATCTACTTGCATCTGATAT TAGCAATAAATGCTGACAGTGATCTCATAAAAAATGATGTGTTGCTCGCGGAAAATATTCCATCAGCGAATTACCAATTT AATACATTTTTTAGCAATACTTTCGAGATTGATGTTAAAAAATATCTGGGTAAATCAGAAGATAACGAAGTTGAAATAAA AGCGGGTAATGAAAGAATCTCTATTGGAATACGTAATGTATCGAATGGAAAACTTGAAAGACAACAGTTTCTTTTCCCAC TGGACTATGAGAATAAATTACAAGAACAATTAGATAAGTATTTTACGATTGAATCGCACCCATTATTATACAGGTATACC ATTGGTAGTAAGATTGCGAATGTGATTTTTGAAAAGTTATACAGTCGTATTGACTTTAACAAAGAACAATATATATCCTT TATAAAGGACGCATTTATTCATTTTTATGATTATAGCAGGCGATATGCTATTAGTGAGAATATCGATAAAGACGCTGTAA CAAACAATATCGCATTGATGAGCACTTTTTATGACAGTGATAATACGTCAGGTGAGGTTTTAAATAATGATTTTACAGAA GAAGAGTCATTTGAAACTGCGTTAGATGTAGAGCATGCAATAGTGCTTGGATTTGCTGATGATAATTTTGAAACAAAACC TGTTCATTATCAGGATTTATTAACACGATTTAGTGCCTTTCAAGATACCGTGTTTAATCTGTTTCCTGAAATGCACTCTT CGCATTACCACGATATTTGTAGCGTAAGTGTGGATATGACAAAGGGAACGCAATGCATGATTCACTTGATGGTGAATGAA GAAGTTTTCATGTCTCTGCCTGTTCCAGTTGCCACGATGGTACGTGAAGATGCAAGTAATTTAGTCAATCTTAAAACACT ACTCAATGATGGTTGTTTCATTAAATATAGTCATTTTAATGACGTGGCATTAATAAAGCAAAACATAAGTAATCTCTATT TATCACACACTGTTGTGAATGAAAGCATATTGAAAAAATGTTGTTTTGAAAACGGCAGTTTAGGTGATGTTAAAATAACA AATAGCAATGTAATAAACAGTGCATTCAAAAATATTTCGTTTAGATCTGTTAAAATTAATAACGTAAATACTCATTCTTT AAAATTTATTAACTGCAATTTTTTCAATGTTGATATGATAAGAGTTAATCTCAGCAAATGTCTTTTTCATGAATGTAGTA TGCATGGTGTCAAGATAAAACCCTGGTTGCCTGTAAAATGGACAAAAGAATTAATAAGTGATTATTTGTATGGCTGTTTA CTATCTCTGTACTCTATCTGTGCAAGGGATATATATAATATGAACGCCGGGAATAACGTGAAGGTTGCTGCGGATGCTTT CCTTGAAATTATTTTCTCTCTTAAAAATAAATATTGTATTAAACTATTAAGCGCTCAGGATCGGGCGTTTATATACGAGT TTGCAAGAATGATCTTCGCTTATATTAATGACAAAAGCATTGAGATCTTATTACTTTCTTGTTTTGCGGCGGCTGACCAA AAAGCAATCCAGCGGTATAGACCTCAGTCACAAGATGGGGAAGACTTTAGGAGTCATTTACAATATAAGTTGCCTCTTTC CGCTCATTAA
Upstream 100 bases:
>100_bases TATTTCGTTAATTAATATAAATACAAAAGGCGTTGTGCTTTTATAATTATAAAGCGCGAGGAGTTCGGTGGATTATCGTT TTTCTTGGGTGATTTTTAAT
Downstream 100 bases:
>100_bases TGTTGTTGGTGCAACATAATAAGACAGGTAAGCGGTACCCTATAATGAAACCAATATCGGGTTATGCAACGGATAATGTA AAGACTTAAGTGGGTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MINNISDQASSFPGTQLNQSDNFLDSLREFFAILNPSRKGELSTWDTIYLHLILAINADSDLIKNDVLLAENIPSANYQF NTFFSNTFEIDVKKYLGKSEDNEVEIKAGNERISIGIRNVSNGKLERQQFLFPLDYENKLQEQLDKYFTIESHPLLYRYT IGSKIANVIFEKLYSRIDFNKEQYISFIKDAFIHFYDYSRRYAISENIDKDAVTNNIALMSTFYDSDNTSGEVLNNDFTE EESFETALDVEHAIVLGFADDNFETKPVHYQDLLTRFSAFQDTVFNLFPEMHSSHYHDICSVSVDMTKGTQCMIHLMVNE EVFMSLPVPVATMVREDASNLVNLKTLLNDGCFIKYSHFNDVALIKQNISNLYLSHTVVNESILKKCCFENGSLGDVKIT NSNVINSAFKNISFRSVKINNVNTHSLKFINCNFFNVDMIRVNLSKCLFHECSMHGVKIKPWLPVKWTKELISDYLYGCL LSLYSICARDIYNMNAGNNVKVAADAFLEIIFSLKNKYCIKLLSAQDRAFIYEFARMIFAYINDKSIEILLLSCFAAADQ KAIQRYRPQSQDGEDFRSHLQYKLPLSAH
Sequences:
>Translated_589_residues MINNISDQASSFPGTQLNQSDNFLDSLREFFAILNPSRKGELSTWDTIYLHLILAINADSDLIKNDVLLAENIPSANYQF NTFFSNTFEIDVKKYLGKSEDNEVEIKAGNERISIGIRNVSNGKLERQQFLFPLDYENKLQEQLDKYFTIESHPLLYRYT IGSKIANVIFEKLYSRIDFNKEQYISFIKDAFIHFYDYSRRYAISENIDKDAVTNNIALMSTFYDSDNTSGEVLNNDFTE EESFETALDVEHAIVLGFADDNFETKPVHYQDLLTRFSAFQDTVFNLFPEMHSSHYHDICSVSVDMTKGTQCMIHLMVNE EVFMSLPVPVATMVREDASNLVNLKTLLNDGCFIKYSHFNDVALIKQNISNLYLSHTVVNESILKKCCFENGSLGDVKIT NSNVINSAFKNISFRSVKINNVNTHSLKFINCNFFNVDMIRVNLSKCLFHECSMHGVKIKPWLPVKWTKELISDYLYGCL LSLYSICARDIYNMNAGNNVKVAADAFLEIIFSLKNKYCIKLLSAQDRAFIYEFARMIFAYINDKSIEILLLSCFAAADQ KAIQRYRPQSQDGEDFRSHLQYKLPLSAH >Mature_589_residues MINNISDQASSFPGTQLNQSDNFLDSLREFFAILNPSRKGELSTWDTIYLHLILAINADSDLIKNDVLLAENIPSANYQF NTFFSNTFEIDVKKYLGKSEDNEVEIKAGNERISIGIRNVSNGKLERQQFLFPLDYENKLQEQLDKYFTIESHPLLYRYT IGSKIANVIFEKLYSRIDFNKEQYISFIKDAFIHFYDYSRRYAISENIDKDAVTNNIALMSTFYDSDNTSGEVLNNDFTE EESFETALDVEHAIVLGFADDNFETKPVHYQDLLTRFSAFQDTVFNLFPEMHSSHYHDICSVSVDMTKGTQCMIHLMVNE EVFMSLPVPVATMVREDASNLVNLKTLLNDGCFIKYSHFNDVALIKQNISNLYLSHTVVNESILKKCCFENGSLGDVKIT NSNVINSAFKNISFRSVKINNVNTHSLKFINCNFFNVDMIRVNLSKCLFHECSMHGVKIKPWLPVKWTKELISDYLYGCL LSLYSICARDIYNMNAGNNVKVAADAFLEIIFSLKNKYCIKLLSAQDRAFIYEFARMIFAYINDKSIEILLLSCFAAADQ KAIQRYRPQSQDGEDFRSHLQYKLPLSAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67747; Mature: 67747
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINNISDQASSFPGTQLNQSDNFLDSLREFFAILNPSRKGELSTWDTIYLHLILAINADS CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEECCCC DLIKNDVLLAENIPSANYQFNTFFSNTFEIDVKKYLGKSEDNEVEIKAGNERISIGIRNV HHHHCCEEEECCCCCCCEEEEEEECCEEEEEHHHHCCCCCCCEEEEEECCEEEEEEEEEC SNGKLERQQFLFPLDYENKLQEQLDKYFTIESHPLLYRYTIGSKIANVIFEKLYSRIDFN CCCCCCHHHCCCCCCHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCC KEQYISFIKDAFIHFYDYSRRYAISENIDKDAVTNNIALMSTFYDSDNTSGEVLNNDFTE HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCC EESFETALDVEHAIVLGFADDNFETKPVHYQDLLTRFSAFQDTVFNLFPEMHSSHYHDIC HHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE SVSVDMTKGTQCMIHLMVNEEVFMSLPVPVATMVREDASNLVNLKTLLNDGCFIKYSHFN EEEEECCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC DVALIKQNISNLYLSHTVVNESILKKCCFENGSLGDVKITNSNVINSAFKNISFRSVKIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCEEEEEEEC NVNTHSLKFINCNFFNVDMIRVNLSKCLFHECSMHGVKIKPWLPVKWTKELISDYLYGCL CCCCCEEEEEEECEEEEEEEEEEHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH LSLYSICARDIYNMNAGNNVKVAADAFLEIIFSLKNKYCIKLLSAQDRAFIYEFARMIFA HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHH YINDKSIEILLLSCFAAADQKAIQRYRPQSQDGEDFRSHLQYKLPLSAH HHCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEECCCCCC >Mature Secondary Structure MINNISDQASSFPGTQLNQSDNFLDSLREFFAILNPSRKGELSTWDTIYLHLILAINADS CCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEECCCC DLIKNDVLLAENIPSANYQFNTFFSNTFEIDVKKYLGKSEDNEVEIKAGNERISIGIRNV HHHHCCEEEECCCCCCCEEEEEEECCEEEEEHHHHCCCCCCCEEEEEECCEEEEEEEEEC SNGKLERQQFLFPLDYENKLQEQLDKYFTIESHPLLYRYTIGSKIANVIFEKLYSRIDFN CCCCCCHHHCCCCCCHHHHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCC KEQYISFIKDAFIHFYDYSRRYAISENIDKDAVTNNIALMSTFYDSDNTSGEVLNNDFTE HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHCCEEEEEEEECCCCCCCCCCCCCCCC EESFETALDVEHAIVLGFADDNFETKPVHYQDLLTRFSAFQDTVFNLFPEMHSSHYHDIC HHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE SVSVDMTKGTQCMIHLMVNEEVFMSLPVPVATMVREDASNLVNLKTLLNDGCFIKYSHFN EEEEECCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC DVALIKQNISNLYLSHTVVNESILKKCCFENGSLGDVKITNSNVINSAFKNISFRSVKIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCEEEEEEEC NVNTHSLKFINCNFFNVDMIRVNLSKCLFHECSMHGVKIKPWLPVKWTKELISDYLYGCL CCCCCEEEEEEECEEEEEEEEEEHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH LSLYSICARDIYNMNAGNNVKVAADAFLEIIFSLKNKYCIKLLSAQDRAFIYEFARMIFA HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHH YINDKSIEILLLSCFAAADQKAIQRYRPQSQDGEDFRSHLQYKLPLSAH HHCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA